Quercus suber (cork oak): 112023364
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Entry
112023364 CDS
T05868
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Module
qsu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112023364
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112023364
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112023364
NCBI-ProteinID:
XP_023911741
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MAKFLLCVLVFALCFVSTQSRPIFIDSRKVYNVVDYGAVGDGLVDDTKAFMDAWKATCKS
SMSSPTMHVPQGMTFLLQPLTFNGNCKSNNITVQIDGTIIAPSDPSAWKCPDDKCLIWIE
FHDFKGLLIRGSGTINGQGKKWWDLKCKENKRICGRKPTGFVIGGSNNVHIDGLTFEDSP
QMHIAFERSEWVKATSLTIQAPKHSPNTDGIHIQHSKNIIIHNTSIGTGDDCISIGDGSS
HININNIDCGPGHGISIGSLGKDGKHETVEFVHVKDVSFTGTTNGARIKTWQGGKGYARN
ITFEHITSIGSARPIIIDQYYCDHKVHKHCGNQESAVRVSNIVYDQIYGTSDKEIAVEFS
CSKSVPCDNIIMRNISLHSTEDGTQTSSICQNVRGLRNGDIIPDVPCLNEAENLPIVN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttctactatgtgttcttgtttttgctttatgttttgtatcaacacaatcc
cgtcccatcttcattgattcaagaaaggtttataacgtggttgattatggagctgtagga
gatggacttgttgatgataccaaggcctttatggatgcttggaaagctacatgcaaatct
tcaatgtcttctcccaccatgcatgttcctcaagggatgacttttttgcttcagcccttg
accttcaatggcaattgcaaatccaataatatcactgtccagattgatggcactataatt
gcaccaagtgatccttctgcatggaaatgccctgatgacaaatgccttatatggatagaa
ttccatgacttcaagggtctccttatccgtggatctggtactatcaatggacagggaaaa
aagtggtgggatctgaaatgcaaagaaaataaaagaatttgtggcaggaaaccaactggt
tttgtaataggaggctccaacaatgtacacattgatggcctaacctttgaggacagtcca
caaatgcacattgcttttgaaaggtcggaatgggtgaaagctacttctctcaccatccaa
gcccctaagcatagccctaacaccgatggaattcatatccaacattccaaaaacatcatc
atacacaacactagcattgggaccggtgatgactgtatttcgattggtgatggttcgtca
cacatcaacatcaacaatattgattgtgggccaggtcatggaataagcattggaagtctg
ggtaaggatggaaagcatgaaacagtagagtttgttcatgtcaaggatgtctctttcacg
ggaaccacaaatggagctagaataaagacatggcagggagggaaaggatatgcaagaaat
ataacttttgagcatatcacatctattggttcagctcgtcctatcatcattgatcaatat
tactgtgaccacaaggttcacaagcactgtggaaatcaagaatcggcggttcgtgttagt
aatattgtgtacgatcaaatatatgggacatcagataaagaaatagcagtagaattttca
tgtagcaagtcagttccatgcgacaacattataatgaggaacattagtttacactcgact
gaagatggaacccagacttcatctatatgccagaatgttagaggacttagaaatggtgat
ataattccagatgtaccttgcctcaatgaagctgagaatttaccaatagtgaattaa
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