KEGG   Quercus suber (cork oak): 112024154
Entry
112024154         CDS       T05868                                 
Name
(RefSeq) uncharacterized protein LOC112024154 isoform X1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03022  Basal transcription factors
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112024154
  09124 Replication and repair
   03420 Nucleotide excision repair
    112024154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112024154
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112024154
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112024154
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112024154
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 112024154
NCBI-ProteinID: XP_023912561
LinkDB
Position
Unknown
AA seq 191 aa
MVVSSSNPHSKEISIRRRIASIFNKREEDFSSLKEYNDYLEEVEDMTFNLIEGIDVPAVE
AKIAEYEKENHDQIMINRARKAEELAAAQAASKGPAQNDSDGAPNQSSQTGYGTGAQGQY
APTFAGGQPRPTGMAQQPVPLGGGLDLHGYAADDEETMKLRAERGGRAGGWSAELSKKRA
LEEAFGSIWIY
NT seq 576 nt   +upstreamnt  +downstreamnt
atggtggtttcaagttctaatccacacagcaaggagatttctatcaggaggaggattgcc
agcatattcaataaacgagaagaggatttttcatccctaaaagaatacaatgattatttg
gaggaagtggaggacatgacatttaacttgattgaaggaattgatgtccctgctgttgaa
gcaaaaatcgcagagtatgaaaaagaaaatcatgaccaaataatgataaacagagctcgg
aaggctgaagaattggctgcagctcaggctgcaagcaagggtcctgcacagaatgattct
gatggggccccaaaccaaagctctcaaacaggatacggtactggtgcacagggacaatat
gctcctacatttgctggagggcagccacgaccaactggcatggcgcaacaaccagttcct
cttggagggggactcgacctccatggttatgctgctgatgatgaggaaacgatgaagctc
cgagcagagagaggtggaagggcaggagggtggagtgcagagctgagcaagaaaagggca
cttgaagaagcgtttggaagcatctggatctattag

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