Quercus suber (cork oak): 112024705
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Entry
112024705 CDS
T05868
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112024705
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qsu01002
]
112024705
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112024705
03036 Chromosome and associated proteins [BR:
qsu03036
]
112024705
Peptidases and inhibitors [BR:
qsu01002
]
Metallo peptidases
Family M1
112024705
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112024705
Coactivators
SAGA/TFTC/STAGA complex
112024705
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112024705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
Peptidase_M1_N
HEAT_2
VasI
Motif
Other DBs
NCBI-GeneID:
112024705
NCBI-ProteinID:
XP_023913098
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MAKPRKAKNDDAAKSDNNSSALVRHQKLCLSIDPDHRQIHGHTELEIAVPEIGIVGLHAE
NLGIGSVLVDGEPAEFEYYPHPYARNVESDKRWSAVSTPSSAADVATSVYISALERELIP
NLLINCCKGLKSVGVNEQPEQPQVVAENGFHPASEAKQQNVRLIRIEYWVEKAEAGIHFK
DNVVHTDNQIRRARCWFPCMDDSSQRCCYDLEFTVANNLVAVSNGSLLYQVLSKDDPSRK
TYVYKLNVPVAAQWISLAVAPFEILPDHQFNLISHMCLPANMLKLRNTVEFFHNAFSCYK
DYLSVDFPFESYKQVFIEPEMAVSSLSLGASVSIFSSQVLFDEKVIDQTIDTRIKLAYAL
ARQWFGVYITPEAPNDEWLLDGLAGFLTDYFIKKNLGNNEARYRRYKANCAVCMADDSGA
TALSFSASCKDLYGTQCIGLYGKIRSWKSVAIIQMLEKQMGPESFRNILQTIVSRAEDGT
RTSRSLSTKEFRHLANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVL
RGCTASPDSSASVLNVYADSENRDGDIGWPGMMSIRVYELDGMYDHPILPMAGDTWQLLE
IQCHSKLAARRFQKPKKGSKPDGSDDNGDVTPALDMRSSSESPLLWMRADPEMEYLAETH
FHQPVQMWINQLEKDRDVIAQAQAIATLEALPQLSFSVVNALNSFLTDSKAFWRVRIEAA
FALAKTASEQETDWAGLFHLVKFYKSRRFDANIGLPKPNDFHDFPEYFVLEAIPHAVAMV
RAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSIIFLTSLLK
RIDRLLQFDRLMPSHNGILTVSCIRTLTQIALKLSEFIPFDRVLELIRPFRDLKTIWQVR
IEASKALLDLEFHCKGIDATLSLFVKYLEEEPSLRGQVKLGIHAMRLCQISSGSGSNVNI
KNDTLMSLLSLLDSSIAFNSIFLRHHIFCIIQILSGRPPTLYGVPRETRTLLMGDAETCI
EQKNIFSALVPEVKPPELPPDIPNPPELAPNPPELAPDIPNPSELPSDIPILPEPLSNTP
HPLEPPPVIPNPSFDSMAIPLASRESDTVSNSRERKMPSIKIRVRQSAATSRAEEIDNQT
VEKSQGGQHETDHGASSSVSVDAPQRNLTEAVSINNQILEEVNSCHDHGSRLTASIGSAK
PTSDGDEIGKELQCTADSSKVSVQVQADVPLSSSFAQDNNLDADAHKYVSLQTLSVGRHG
SDGGSFVMMESSRHGKEKSKKKDKEKKRKRGDHKGHRDDPEYLERKRLKEEKKRKEKEMA
KVLKVANASSVEPTKKEEPRIKLASVQLNPKEPSASDAVTKRVDIRQLNPNEPRADVMTK
KVDVKPEASEGTSAAPKIRIRLKTRTLNKL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaaggccaaaaacgacgacgctgctaagtccgacaacaattcctct
gccctagtccgccaccaaaagctctgcctctccatcgaccccgaccaccgccaaatccac
gggcatacggagctggaaattgcggtgccggagatcgggattgtagggttacacgccgag
aatttggggattgggagcgttttggtcgacggagagcccgccgagttcgagtactacccc
cacccgtacgctcgcaatgtggagagcgacaagaggtggagcgcggtgtccacgccgagc
tctgctgccgatgttgccacttccgtgtatatatcggcgctcgagagggaattgatcccc
aatttgttgattaattgctgcaagggtttgaagagtgtgggtgtgaatgaacagcccgag
cagcctcaggtagtagccgagaacgggttccatccggccagcgaggccaagcagcagaat
gtgagattgattcgtattgaatattgggttgagaaagcagaggcggggattcactttaag
gataatgtggtacatactgataaccagataaggcgtgcacggtgctggttcccttgtatg
gacgacagttcacagcgctgctgctatgatctggaatttacggttgccaacaatcttgtg
gctgtcagcaatggaagcttgctatatcaggttttgagcaaggatgatccttctcggaaa
acatatgtctataaattaaatgttcctgttgctgctcagtggatatctttggcagttgca
ccattcgaaatccttcctgaccaccaatttaatctcatatcacacatgtgtttgcctgct
aatatgttaaagcttcggaatactgtggaatttttccataatgcattcagctgttataag
gattacctttcggtggattttccatttgagtcatacaagcaagtttttatagagcctgag
atggcagtatcctcattgagcctgggggcttccgtgagcatctttagttcccaagtgcta
tttgatgagaaggtcattgatcagaccatagacacaaggattaaacttgcgtatgccctt
gcaagacagtggtttggtgtatatatcactcctgaggcaccaaatgatgagtggctgttg
gatggtctggctggttttttgactgattattttatcaagaaaaatttggggaacaatgaa
gcacgttatcggcgttataaggcgaattgtgctgtttgcatggctgatgatagtggtgca
actgctttgagcttctctgcatcttgtaaggatttgtatggaacccagtgcattggtcta
tatggaaaaataagatcatggaagtctgtggctatcattcaaatgttggaaaagcagatg
gggcctgagtcttttcgtaacattttgcagacgatagtttctcgggctgaagatggaact
cgtacttcaagatctcttagtacaaaggagttccggcacttggctaataaggttggaaat
cttgaacgtccatttcttaaagatttttttcctcgatgggtaggatcgtgtgggtgtcca
gttctaaggatggggttctcctataacaaaaggaagaatatggttgagttggctgtgtta
cggggatgcacagcttcaccagattccagtgcatcggttcttaatgtttacgcagattca
gaaaaccgagatggtgacattggttggcctgggatgatgagtatcagagtttatgagctt
gatggtatgtatgaccatccaattctgccaatggctggcgatacatggcagctcttggaa
atacaatgccattcaaagctcgctgctagacgctttcagaagcccaaaaagggttcaaaa
cctgatggatctgacgataatggtgatgttacacctgctctagatatgcgctccagttct
gaatcccccttattatggatgagagcagaccctgaaatggaataccttgctgaaactcat
tttcatcagcctgtacagatgtggattaatcagttagagaaggacagagatgttattgct
caggcacaagcaattgcaacattagaggcattgccacagctttcattttctgttgttaat
gccctgaatagtttcctcactgactccaaggccttctggagagttcggattgaagcagct
tttgcattggctaaaacagcatctgagcaggaaactgattgggctggtttatttcatttg
gtgaaattttataaaagtcggaggtttgatgcaaacattggactccccaagccaaacgac
tttcatgattttcctgagtactttgttcttgaggccatcccacatgctgtagcgatggta
agggctgcagacaagaaaagcccaagagaagctgtcgagtttgttttacaacttttgaag
tataatgacaataatgggaatccttactctgacgtgttctggcttgctgcactggtccag
tcagttggtgagcttgaatttgggcaacagagtattatctttttaacttctcttctcaag
cgcatcgaccgacttttgcaatttgacaggctgatgcctagccacaacgggattttaaca
gttagctgtatccggacattgacacagattgcattaaagctttcagagttcatacctttt
gatcgtgtcttagaacttataagaccttttcgggatttgaagacgatatggcaagttcga
attgaagcaagcaaggcacttcttgatctggagttccactgcaaaggcattgatgccaca
ttgtcattgtttgtcaaatatctagaggaagagccatcgttaagaggacaggtgaaattg
ggtatacatgctatgcggttatgtcagataagtagtggatctggttcgaatgttaacata
aagaatgacactctcatgtctttactttctctgcttgatagcagtatagcattcaacagt
atctttcttcgtcaccacatattctgcattatacaaatcctttcagggaggcccccgact
ctctatggagtacccagagagactagaacattgctcatgggtgatgcagagacttgcatt
gaacagaagaacatattttctgctcttgttcctgaagtgaaacctccagaactacctcct
gacatcccaaatcctccagaactagctccaaatcctccagaactagctcctgacatccca
aatccttcagaactaccttctgacatcccaatccttccagagccactttccaacactcct
catcctttggaaccccctcctgtaatcccaaacccatcatttgatagtatggccattccg
cttgcttccagggaatcagatactgtctcaaacagtcgtgaacgaaagatgccatctatt
aagatcagggtcagacaatctgctgctaccagtagagctgaggagattgataaccaaact
gtagaaaaatctcaaggtgggcaacatgaaactgatcatggggctagcagttctgtttct
gtggatgcacctcaaaggaatttgacagaggctgtgagcattaacaatcaaattcttgag
gaagttaactcatgtcatgatcatggctcccgtttgactgccagcataggtagtgcaaaa
cctaccagtgatggtgatgaaattggaaaggaactccagtgcactgctgattcaagcaaa
gtttctgtacaagttcaggctgatgttccattatcatctagcttcgcgcaagataataat
ttagatgctgatgcacacaaatatgtgagtcttcaaactctttcagttggtagacatggt
tctgatggtggttcgtttgtcatgatggaatcttctcggcatgggaaagagaagagtaag
aagaaagacaaggaaaagaaaaggaagcggggagaccataaaggacaccgggatgaccct
gagtatttggaacggaaacgtttgaaggaggagaaaaagcgtaaagaaaaggagatggca
aaggtgctcaaggtggcgaatgcatcttcagtagaaccaactaagaaagaggaacctaga
atcaagttagcatcagtgcaattgaatccaaaggaacccagtgcatccgatgcagtgacc
aaaagggttgatatcaggcaattaaatccaaatgaacctagagctgatgttatgaccaaa
aaggttgatgtcaaacctgaggcatcagaaggaacttctgctgctccaaaaatccgaatt
agattgaaaacccgaacgcttaacaaattatag
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