KEGG   Quercus suber (cork oak): 112025393
Entry
112025393         CDS       T05868                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112025393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    112025393
   03041 Spliceosome [BR:qsu03041]
    112025393
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112025393
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112025393
Spliceosome [BR:qsu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112025393
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 TFIIA
Other DBs
NCBI-GeneID: 112025393
NCBI-ProteinID: XP_023913833
LinkDB
Position
Unknown
AA seq 509 aa
MARKRKLDSQTQSGEPTIEPPQKQQQQQQQQQQQQQQQQENIEYEEVEEEVEEEVEEEVE
EDEDEDEDDEDDEEQQQQNAANQTANSTSTSAGADGDDGDGDDDEPIQNLLEPFSKDQII
NLLREAADKHRDVADRIRKVADEDPAHRKIFVHGLGWDTTAETLTSVFKQFGEIEDCKAV
CDKISGKSKGYGFILFKSRRGARNALKQPQKKIGNRMTACQLATIGPVPMGNSAAVAATS
SVATPAAPLSEYTQKKIYVSNVGAELDPRKLLAFFARYGEIEEGPLGLDKVTGKPKGFCL
FVYKTVESAKKALEEPHKNFEGHILHCQRAIDGPKPNKSQQHQHQQQQQHQHHQNPNPHT
VPFQRNDNPGYVAGAPGTGPGHLMAPAAAGAGMGYNQGAAAAQALNPALGQAITALLASQ
GAGLGLTNLLGTLGSAAAAVNPGVPAAAGHGMQGAYPSQTNISPGVIGGYGNQGGLQGGY
PSQQMGQGGSGRGQHGAGQYGNIAPYMGH
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgaggaagcgaaagctcgattcacaaacccaatccggcgaaccaacaatcgaacct
ccacagaaacaacaacaacaacagcagcagcagcagcaacagcaacagcaacaacaagaa
aacatcgaatacgaagaagtcgaagaggaagttgaagaagaagtagaagaagaagtggaa
gaagacgaagacgaagacgaagacgatgaagatgacgaggaacaacaacaacaaaatgcg
gccaatcagacggctaattccacctccacctcagccggcgctgatggcgacgacggcgac
ggagacgacgatgagccgatacagaaccttctggaacctttcagtaaggaccagattata
aacctactccgcgaagcagcggataagcaccgtgatgtggcggatcggatccgaaaggtg
gcggatgaggacccggcccaccgcaagatcttcgtccacggtctcggttgggacaccacc
gccgaaaccctaacctcggtgttcaagcagttcggcgagatcgaagattgcaaggcggtt
tgcgacaagatctcaggtaaatccaagggttacggtttcatcctcttcaagagccgccgt
ggcgcccggaatgctcttaagcagcctcagaaaaagatcggaaatcggatgacggcgtgc
cagctggcgacgattgggcctgttccgatgggtaattctgcggcggtagcagctacgtct
tcggtggcgacccccgcggcgccgttatcggagtatacgcagaagaagatatatgttagt
aatgttggggcggagttggatccaaggaaattgctcgctttctttgctaggtatggagaa
atcgaagaaggaccgttgggacttgataaggttactgggaagccaaaagggttttgtttg
tttgtttataagacagttgagagtgctaagaaggctctagaagagcctcacaagaatttt
gagggccatatattgcattgccagagggctattgatggtcccaagccaaacaagtctcag
cagcatcaacatcagcaacagcagcaacaccagcatcaccagaacccgaacccacatact
gtgccattccagaggaatgataatcctggatatgttgctggagcgcctggtactgggccg
ggtcatttgatggctcctgctgcagctggagcgggaatggggtataatcagggtgctgca
gcagctcaggctttgaatcctgcacttggacaggccataacggcgttgctggctagtcag
ggtgctggattggggttgactaatttgttggggacgcttggttcggctgcagctgctgtg
aacccgggtgtgcctgctgcagcggggcatgggatgcagggtgcttatccgagccagaca
aatattagtcccggagtgattggagggtatggaaatcaaggaggattgcagggtggttac
ccgagtcaacagatgggtcaaggcggttctggaaggggccagcatggagctgggcagtat
ggtaacattgctccttacatggggcactag

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