Quercus suber (cork oak): 112025472
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Entry
112025472 CDS
T05868
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112025472
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112025472
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112025472
NCBI-ProteinID:
XP_023913915
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All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MGNIHGHRKHRNSSHQNKPPSNSQPFKYGPSDQAPQVPSSSKHKPKTNMVSLPYGHVDST
LRALAGQAEGFGHRAIGGLHGSLYHVTTLADDGPGSLREGCRNKEPLWIVFEVSGTIHLS
SYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDAIQIKPNSKHI
WIDRCTLRDYDDGLIDITRESTDITVSRCHFLQHDKTMLIGADPSHIGDRCIRVTIHHCF
FDGTKQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKRVAFKYLTE
KATDKEEATTGCINSEGDLFISATQAGLMTKDTAHKMFHPSEHYPIWTVEPPTDDLKQVL
QHCTGWQSVPRPGDQKAVA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatccacggccatcgcaaacaccgtaacagctctcatcaaaataaaccgcct
tcaaattcacagccctttaaatatggtccgtccgatcaagctccacaagtccccagctcc
agcaagcacaagcccaaaaccaacatggtctccttgccttacggtcatgtggactcgacc
ctacgagccctcgccggccaagccgaggggttcggccaccgcgccatcggtgggctccac
ggttctctttaccatgtcaccaccttagcagatgatgggccaggatcacttcgtgaagga
tgtcgcaataaagaaccactatggattgtgtttgaagtttcaggcaccattcatctatct
tcttacttgaatgtgtcatcctataagaccattgatggccgaggacaaaggattaaactc
actgggaaaggtttgaggctgaaggagtgtgaacatgtaattatatgcaatctggagttt
gaaggtggtaggggtcctgatgttgatgccatccaaatcaaacctaattcaaaacatata
tggatagaccgctgcacccttcgtgactatgatgatggactgatagatatcactagggaa
agcacagatattactgtttctaggtgtcactttttacaacatgacaagacaatgctcatt
ggagcagacccttctcatattggcgacagatgcattcgagtgaccattcaccattgtttt
tttgatgggaccaaacagcggcatcctcgagttagatatgggaaagtgcatctttacaac
aattataccagaaactggggcatttatgctgtttgtgccagtgtggaatcacagatatac
tcccaatgcaatatatatgaagcaggacaaaagagggttgcatttaaatatctcacagag
aaggcaactgacaaggaggaggcaacaactggctgcataaactctgaaggggatttattc
ataagtgcaactcaagcggggctaatgaccaaggatactgcacacaaaatgtttcatcct
agcgaacactaccctatatggacagtggaaccgcccacggatgatcttaagcaagttctc
cagcattgcacaggatggcagtctgttcctcgacctggagatcagaaggcggtagcgtag
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integrated database retrieval system