KEGG   Quercus suber (cork oak): 112026055
Entry
112026055         CDS       T05868                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112026055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    112026055
   03041 Spliceosome [BR:qsu03041]
    112026055
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112026055
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112026055
Spliceosome [BR:qsu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112026055
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 112026055
NCBI-ProteinID: XP_023914500
LinkDB
Position
Unknown
AA seq 509 aa
MAKKRKLRSSDPEPAKAPEPEPEQPVEEVQREPQPDPIPENEEEEEEQQAQDNMAVDDSK
EDPEEQQQQQQQQQEGEAEEEEEGEGEGEQEQNETLEAASNDAVQAEAEANGTAAAQEEE
EVEEDDEDEDVEKLLEPFTKDHLVALIKKGVSKHPDLIEIVRELADADPAHRKIFIHGLG
WDTTAETLTSVFGKYGEIEDCKAVTDRVSGKSKGYAFILFKHRSGARKALKQPQKQIGNR
TTSCQLAAAGPVPAPPPLTPPVSEYTQRKIFVSNVSAEIEPDKLLQYFKQFGEIEDGPLG
IDKQTGKPKGFALFVYKSVESARKALEEPHKNFEGFTLHCQRAIDGPKPSNKPFHHHQQH
HQPQQHHHPHHHNPHPHHYHSRKDKNKYSSGGPGGGPGHLMAPSGPTVGFNPAAAPGLNP
VLGQALSTLLASQGAGLGGLGNLLGGLGGAPMNQAAGPPTAGGYGSQAGGGGGGYGNQPV
MQYQNPQMGQSSGARPHLHPGAGAPYMGH
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggccaagaagcgaaagctgcgatcctccgaccccgaacccgccaaggcgcccgaaccc
gaacccgaacagccagtcgaagaagtgcagcgcgaaccgcagcccgacccaatcccagaa
aacgaagaagaagaagaagaacaacaagctcaggataacatggctgtagacgattctaaa
gaagacccagaggaacaacaacagcagcagcagcagcaacaagaaggagaggccgaggaa
gaagaggaaggggaaggagaaggagaacaagagcagaacgaaaccctagaggcggcctcg
aacgacgccgttcaggccgaagccgaagcgaacggaacggcggcggcgcaggaggaggag
gaagtggaagaagacgacgaggacgaagacgtggagaagcttctagagccgttcacgaag
gaccatctcgtggctctgatcaagaagggagtgagcaagcacccggacttgatcgaaatc
gtgcgcgagctcgccgatgcggaccccgcccaccgcaagatcttcatccacggcctcggc
tgggacaccaccgccgaaaccctcacctccgtcttcggcaagtacggcgagatcgaggat
tgcaaggcggtcaccgaccgcgtctccggtaagtccaaaggctacgcctttattctcttc
aagcaccggagcggcgcccggaaggctctcaagcagccccagaagcagatcggcaatcgc
accacttcctgccagctggctgccgccgggcccgtcccggccccgccgccgctcactcct
ccggtctccgagtacactcagaggaagatctttgtcagcaatgtctcggcggagattgag
ccggacaagcttcttcagtattttaagcaatttggggagattgaggatggcccacttggg
attgataagcagactggtaagcctaagggttttgcgctttttgtgtataagagcgttgag
agtgctaggaaggctttggaagagcctcataagaattttgagggatttacattgcattgt
cagagggctattgatggcccaaaacccagcaacaagccttttcatcatcatcagcaacac
catcaaccgcagcaacaccaccatcctcaccaccacaaccctcacccccaccattaccat
tcaagaaaggataagaataagtattcgtccggtggccctggtggtggacccgggcatttg
atggcgccttcaggtcctacagttgggtttaatccggctgcagcgcctgggttgaacccg
gtgctgggtcaggccttgagtacattacttgctagccaaggagccgggttgggggggctt
ggtaatctgcttggaggtcttggtggcgctcccatgaaccaggcagctgggccgccgaca
gcaggaggatatgggagtcaggctgggggcggtggcgggggctatggaaaccagcctgtg
atgcagtatcagaacccacagatggggcagagcagtggtgctaggccccatcttcatcct
ggtgccggtgcaccatacatgggtcattag

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