Quercus suber (cork oak): 112026684
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Entry
112026684 CDS
T05868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112026684
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112026684
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
112026684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
112026684
NCBI-ProteinID:
XP_023915144
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MDSVSPNQSSALTKTRFSDLNPSLSEPVLEALTQAGFEFCTPVQAATIPLLCSYKDVAVD
AATGSGKTLAFVVPLVEILRRNKTPPKPNQVMGVIISPTRELSSQIYDVAQPFVSTLPNF
KSTLLVGGVEVKADLKKIEEEGANLLVGTPGRLFDIMERVDGLDFRNFEILVLDEADRLL
DMGFQKQITSIITRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEMKPSNGPTS
SEQSGFSKTPSGLHNEYMECEADKKPSQLVDFLIKNRSKKIIIYFMTCACVDYWGVVLPC
LPVLKGLSLISLHGQMKQTAREKALASFKDLSSGVLLCTDVAARGLDIPDVDCILQYDPP
QNPDVFLHRVGRTARMGRRGSAIVFLLPKEEAYVEFICIKWGALEERKCSDDAPDVVPQI
RSAAKKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMSEIK
HHSLSTVGFSPVEDINFEDIKFKDKSREKQRKKNLQAKKEAKQQEPKLHKLNKTPKTAAT
VMRKKTARQRRATQTVEDEDELAREYRLLKKLKKGAIDESEFARLTGTDDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtctcccccaaccagagcagcgcgctaaccaaaacgcgcttctccgatctc
aacccctcactttccgaaccggttctcgaagccctaacccaagccggcttcgagttctgc
acgccggtccaagccgccacaatccccttactctgtagctacaaggacgtcgccgtcgac
gccgccaccggctctggcaaaaccctagccttcgtggtcccactcgtcgagatcctccgc
cgcaacaaaactcctcctaaaccaaaccaggtgatgggagtaattatatcgcctacgagg
gagttatcgtcgcagatatatgacgtggctcagcctttcgtttcgacgctgccgaatttc
aagtctacgttgcttgttggaggagtggaagtgaaagcggacttgaagaaaatagaggag
gaaggagctaatttactggtcggcacgcctgggagattgtttgacattatggaacgtgtt
gatggcttggattttcggaacttcgagattttggttttggatgaggccgacaggctcttg
gatatggggttccagaagcagataacttccattataactcgcttgccaaagcttcgtaga
actggtcttttttcagctactcagactgaggcagttgaagagctatctaaagcagggttg
aggaatcctgtgagggttgaagttcgggcagaaatgaagccttcaaatggtccaacatcg
tcagaacaatcaggcttttcaaaaacaccttcaggccttcacaatgagtacatggaatgt
gaagcagataagaaaccatcacagcttgtcgatttccttatcaagaacaggtctaaaaag
attataatatacttcatgacatgtgcttgtgttgactactggggagttgttcttccgtgc
cttcctgttttgaagggtttgtctttgatctcgctgcatggccagatgaagcagactgca
agggaaaaagcattagcttcatttaaagatctttcgagtggtgttcttctatgcactgat
gttgcagctcgaggacttgacattccagatgttgattgtatacttcagtatgatcctcct
caaaatccagatgttttcttacacagagttggccgaactgctcggatgggtagacgagga
agtgccattgtttttctattgccaaaggaagaagcttatgtagagttcatatgtataaaa
tggggtgctcttgaagagaggaaatgctctgatgatgcacctgatgttgttcctcagatc
cgatctgctgccaaaaaggaccgtgatgtcatggagaaaggtgtcagggcgtttgtttca
tatatccgtgcgtataaagagcatcactgctcttacattttcaggtggaaagagcttgaa
attgggaagttggccatgggatatggcctattgcagcttccctccatgtctgagataaag
caccactcactttctactgtgggcttctctccagttgaagacatcaattttgaggatatc
aagtttaaagataagtctcgtgagaaacaaagaaagaagaatctgcaagcaaagaaggaa
gcaaaacagcaagagccaaaacttcacaaactcaacaaaaccccaaagactgcagctact
gtcatgaggaagaaaacggctagacagagacgtgctacccagacagttgaagatgaagat
gagttggcacgagaataccgtctgctgaaaaagctgaaaaagggggctattgatgaaagt
gaatttgctaggttgacaggaactgatgatttatag
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