KEGG   Quercus suber (cork oak): 112027591
Entry
112027591         CDS       T05868                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    112027591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112027591
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      112027591
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 112027591
NCBI-ProteinID: XP_023916012
LinkDB
Position
Unknown
AA seq 978 aa
MRTRNESKRQKQSSGRDNAKKALPESGNRSCLESHDDSGTLADISREAVGRLLRHAKKRD
SSGKEKHYNNLSQHDSIGMTEGGPKRDDKLDVDSGAQWNISEAEGCSKDPMGKTAHEKKV
DEGNLQQFLSENQEELNDSDWEDGSIPISDSTCNLPVTIEFSETSNSGVRKPVRRASAED
KELAELVHKVHLLCMLARGRLVDRACDDPLIQASLLSLLPPHLLNIAKVTELTADALCPL
VLWFQNSFHVKSSTNAERSFPLALAFALETHEGTPEEIVALSVALFRALNLTTRFVSILD
VSSLKPEADRSESFIQDASRSSKGIFKTSTLMVAKPKHASVSPVKSSSCNESGNICETSQ
RGSCKSMDNIAQSKDSPVAGELDAIMSDSLHCEARNDISDASLTKKSQGLNRKGDLEFEM
QLEMALTATAVVTQESKIESDVKDLNSSNFSSPLKRMKRIVSEESPTSSQGISTAVGSRK
VGSPLYWAEVYCNGDNLTGKWVHVDVVNAVIDGELKVEAMAAACKTSLRYVVAFAGQGAK
DVTRRYCMKWYKIGSHRVNSIWWDAVLAPLRELEAGATAGMVHTEKQQIEALTEHEKVKA
SRKLDNPTRDDILGGANLHGKFGLEISKKSGKSFVASRSSLEDMELETRALTEPLPTNQQ
AYKNHQLYAIERWLTKYQILHPKGPVLGFCSGHPVYPRSCVHTIKTKERWLREGLQIKAN
ELPVKELKRSAKLQKVQVPEDDECGGGNYEGTVKLYGKWQLEPLNLPHAVNGIVPKNERG
QVEVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGHSHPVFDGIVVCAEF
KDAILEAYSEEEERREAEEKKRSEAQAISRWYQLLCSIITRQRLNNRYGDSLSSQTSTET
NTQHINNKLNAPVGGGDEGKQSHVCKTEDINHAKLDAQASLPEDHEHVFLTEDQTFDEES
LVLTKRCHCGFSVQVEEL
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgcgaaccaggaacgagtccaagcggcagaaacaatcttctggtagggacaatgctaaa
aaagctctaccggaatcaggaaacagaagctgtttagagtcgcatgatgacagtggaaca
cttgctgacatatcaagggaggctgttggcagacttcttagacatgccaagaagcgtgac
tcttccgggaaagagaaacattacaacaacctgagccagcatgattcaattggcatgaca
gagggtgggccaaaaagagatgataaattagatgtggattcaggggcccagtggaatatt
tcagaggctgaaggttgtagtaaggatccaatgggaaagaccgcccacgaaaagaaagtt
gatgagggaaatttacagcaattcctctcagaaaatcaggaagaattgaatgactcggac
tgggaagatggttcaatacccatttcagattccacatgcaatcttccagttacaattgaa
tttagtgagacatcaaattctggtgtaaggaaacctgttcgtcgagcttctgccgaggat
aaggaattggcagagcttgtgcataaggttcatttgctttgtatgcttgcacgtggcaga
ttagttgacagagcttgtgatgatcctcttattcaggcttctttactgtctcttctacct
ccacacttgctgaacatagcaaaggtcacagaacttactgcagatgctttgtgtcccctt
gttctttggtttcaaaatagcttccatgttaaaagctcaaccaatgcagagaggtcattt
cctttggctttggcctttgctcttgaaactcatgaagggactccagaggagattgttgca
ttgtctgtggcactatttagagctttgaatcttacaacccggtttgtgtccattttggat
gtttcctccttaaaaccagaagctgataggtctgaatctttcattcaagatgcaagcaga
tcgagtaaggggatatttaaaacttcaacactaatggtggctaaaccaaagcatgcttcg
gtctctcctgttaaatcatcttcatgcaatgagagtggcaatatctgtgaaacttctcag
aggggttcatgcaaaagtatggataacattgctcagtccaaagattcacctgttgctggt
gagctggatgctataatgtcagattcattacattgtgaggcaagaaatgatatctctgat
gcaagccttaccaagaaatctcaaggactgaataggaaaggggatcttgagtttgagatg
cagttggaaatggctctaactgcaacagcagttgtgactcaggagagcaaaatagaatca
gatgtgaaagacttgaactcatcaaatttctcttctccactgaaaagaatgaaaagaatt
gtaagtgaagaatctcctacttcttcccaggggatctctactgctgttggctcaagaaaa
gtaggatctcctttgtattgggcagaagtatactgcaacggtgacaacttgactggaaag
tgggtgcatgttgatgttgtcaatgcagttattgatggggagctgaaggttgaagctatg
gctgctgcatgcaaaacatctttgagatatgtagttgcttttgctgggcaaggggccaaa
gacgtgacacgcaggtattgtatgaagtggtacaagataggatcacatcgagttaattca
atttggtgggatgcagtgttggcgccactgagagagttagaggcaggagccactgcaggc
atggtccatactgaaaagcaacaaattgaggccttgactgaacatgagaaagttaaagca
tccagaaagttggataatccaactagggatgatattctaggaggtgctaacttgcatggg
aagttcggcctagaaatctcaaaaaagagtggcaaatcttttgttgctagcaggagctct
cttgaggacatggagttggaaactagggcattaactgagcctcttccaactaaccagcag
gcctataaaaaccatcaactttatgctattgaaaggtggcttaccaagtatcagatactt
catccaaagggtccagttctcggcttttgttctggtcatccagtttatccacggagttgt
gtacacacaatcaagacaaaagaaagatggctacgggaagggctgcaaattaaagcgaat
gagcttcctgtgaaggagttgaaacgttctgcaaagcttcaaaaagtacaggttcctgaa
gatgatgaatgtggtgggggcaattatgaaggaacagttaaactttatgggaagtggcaa
ctggaaccattgaatctgcctcatgctgtaaatggaattgttccaaagaatgaacgtggt
caagtggaagtttggtctgagaagtgcctcccacctggtactgtgcacttgaggttaccg
agggtgttttatgttgccaagagattggagattgattatgcgcctgccatggttggtttt
gaattccgaaatggacactcgcatcctgtctttgatggtattgtggtgtgtgctgagttc
aaggatgcaattttagaggcatactcagaagaagaagaaaggagagaggccgaagagaag
aaacgaagtgaagcacaagctatttctaggtggtatcagcttctttgttccatcataact
cggcaaaggttgaacaaccgttatggtgacagcttgtcatcacaaacatccactgagacc
aacactcaacatattaataacaaattaaatgcaccagttggtggaggtgatgaaggcaag
cagtctcatgtatgcaagacagaagacataaatcatgccaagttggatgctcaagctagc
ctgccagaagaccatgagcatgttttcttgacagaggaccagacttttgatgaggagagt
ttggtgctgacaaagcgatgtcattgtggattttcagtccaagtggaggaattgtag

DBGET integrated database retrieval system