Quercus suber (cork oak): 112027820
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Entry
112027820 CDS
T05868
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112027820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112027820
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
112027820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
112027820
NCBI-ProteinID:
XP_065618486
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAKHGMGMESIVVRGRLAGDANKRIMEENDVLLNIFSQKTCAKLVYVESPISLFGALRTR
NISPVTIFRGDLELSSKMKIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEY
RSVEDTSKVVPPEGRIKGYRYGPQVVPIAPSEWDAVKFKPEKSVKLLGFTDAKNILRHYY
MKDVNVFIADPGNKRAILAVSALARAMKEKNKVAIVRCVWRNGQGSVVVGVLTPNVSDKD
NTPDSFYFNVLPFAEDVREFQFPSFNNFPLSWQPNEQQQEAADNLVKMLDLAPSGKEEAL
QPNFTPNPVLERFYRYLELKSKHPDAAVPPLDETLKKMTEPDPEVLSQNKSVIDTFRRNF
ELKENPKLKKSTRRFLLEKPSGSKEGEGCGNIAAQSVDSIKDTSVIKVENIGNLTPVQDF
ENMMSRRDGPEWIGKAIKDMKKRIFDLVEDSFEGDNYPKALECLVALRKGCILEQEPKHF
NDFLHHLCKFCQKNNLNCFCEFLASKELTLISKTEAIDSEVTDDEARSFLVKSESKTE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacatggtatgggaatggaaagtatagttgtgaggggaaggctcgctggggat
gcaaataagagaataatggaagaaaatgatgttctattgaacatattttcacagaaaaca
tgtgcaaagttggtgtatgtcgagagtccaatatcattgtttggtgcgctaagaactcga
aatatatcaccagttacaatattcaggggtgatcttgaactcagctccaaaatgaagatt
aaggtatgggtttacaagaaaacgtcagaagaaaaatttcccactttgaagaaatattct
gacaaagcacctccaactgataaatttgccacccatgaggtcaaagtagattatgagtac
cgaagtgttgaagatactagtaaagttgtacctccagaaggaaggattaaaggatatcgt
tatggacctcaagtagttcctatagcaccttctgaatgggatgctgtcaagttcaaacca
gaaaagagtgtaaaacttctaggatttaccgatgctaaaaacatattgcgacattattac
atgaaagatgtcaatgttttcattgctgatccgggcaataaaagggcaattcttgcagtt
tctgccctagcaagagcgatgaaagagaaaaataaggtggcaattgtgcgttgtgtttgg
agaaatgggcagggtagtgttgttgtgggggttctgacacccaacgtttctgacaaagat
aatactcctgattccttttactttaacgtgcttccctttgctgaggatgttcgagaattt
cagtttccctccttcaacaatttcccgttgtcatggcagcctaatgaacaacagcaagag
gctgcagataatttggtcaagatgcttgacctggcaccatctggcaaagaggaagctctg
cagcctaactttacaccaaatcctgttctggagcggttttatcgttatcttgaattgaaa
tcaaagcacccagatgcagctgtacctccgcttgatgaaactctcaagaagatgaccgaa
cctgatccagaagtactttctcaaaacaagtctgttattgacacatttcgcaggaatttt
gaacttaaggagaatccaaagctgaagaaatcaactcggcgatttttgctagaaaaacca
tctggatcgaaagagggagagggttgtggcaacattgctgctcaatctgttgattccatt
aaagatacatctgtaattaaggttgagaatattgggaatttgacgcctgtacaagatttt
gaaaacatgatgtcacgtagagatggtccagaatggattggtaaggcaatcaaggatatg
aagaagagaatatttgacttggtggaggactcctttgaaggggacaattatcctaaagca
cttgaatgtctagttgcccttcgcaagggttgcatccttgagcaggaaccaaaacatttc
aatgattttctacaccatctttgtaaattctgccaaaagaataaccttaattgtttctgt
gaatttcttgcatccaaagaactcaccctgatctccaagacagaagccatcgacagtgag
gttacagatgatgaagctagaagttttctggttaaatcagagtcaaaaactgagtaa
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