Quercus suber (cork oak): 112028007
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Entry
112028007 CDS
T05868
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112028007
Membrane trafficking [BR:
qsu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112028007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
112028007
NCBI-ProteinID:
XP_023916411
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MASNPPFHVEDQTDEDFFDKLVDDEFGPTTTTAGSNPKLSEEIDPKFAEGSDSDEAKAFA
NLSISEAGNQLDESVRGGGGSGEGGDDNRGFDFKETKEEKACVDGGAGAESLGAHVEERD
SLVSANSIGCDSVVGSSNDGIGSEFASDSTVSKSSGSGGSGVKEIGWNSFHTDLAPQNGS
HGFGSYSDFFSELDGNSGDFPGNVGGNLNSEAKIITGNEGFVADGVNNSVNYANYQEGQG
QVYGATVEQSSNVQDLSSSQYWENAYPGWKYDPNTGEWYQVGGDDGNTNVQTSESSAVAD
GNTEISHMQQAAQSVVGTATDTGMTGSLSNWNQVSQGNNGTESVSNWNQVSQANNGTESV
SNWNQVSQVNNGYPEHMVFDPQYPGWYYDTIAQEWRTLDTYTSSIQSTAQTPDQQQHQNG
FVSTGSFNEINGSLYGEYGQADNYRSQGFGSQGQDGSWAGAYGNNRQQELNSWQAETVPR
SEGFTTLGGNQHFDGSYVNNDQQKSFNSFGPVSSYNGASQSHGEANGNVQFKSSVPGGNF
SQQFSPANLKLNEQTQFSVDYFGSQPVNFSQQSFESVHQTSYASNVGRSSAGRPPHALVT
FGFGGKLLVMKNSNSSLSSSSFGSQDPVGSSLSVLNLMEVVLGNADASSLGSGASNYFHA
LCQQSFPGPLVGGSVGGKELNKWIDERIASCELPNMDYRKGEALRLLLSLLKIACQHYGK
LRSAFGVDTILRENDSPESAVAKLFASAKRNSMQFSEYGALSHCLQNLPSEGQIRATASE
VQNLLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYVDTVKQMALHQLVAGSPLRTLC
LLIAGQPAEVFYSDSTTDSSLPGAVNMPQQPAQIGATCMLDDWEENLAVITANRTKDDEL
VIIHLGDCLWKERSEITAAHICYLIAEANFEPYSDTARLCLIGADHWKLPRTYVSPEAIQ
RTELYEYSKVLGNSQFILLPFQPYKLIYAHMLVEVGKVSDSLKYCQAVLKSLKTGRAPEV
ETWKQLILSLEERIRTHQQGGYSANSAPGKLVGKLLNFFDSTAHRVVGGLPPPAPTLQGG
VPGNGHYNQPTGPRVSSSQSTMAMSSLMPSASMEPISDWMADGSRMTMANRSVSEPDFGR
TPRQVDSSKGMASPNEQGKASVSGGASRFPRFNFGSQLLQKTVGLVLRPRPGKQAKLGET
NKFYYDEKLKRWVEEGVEAPAEETALPPPPTTTAFQNGMSDYNLKSALQKEGTPNNGSPE
YKTPTPEHSSGIPPIPSSSNQFSSRGRMGVRARYVDTFNQGGGKPANLFQSPSVPSVKPP
VAPNAKLFIPTPASLGEQTMEAIAENGQEETSTNVDRSTSIANDSFQSPIHSSSMTVQRF
PSMDNIPYMGDLTKGNGNGSLPPHSRRTASWGGSHSTPFSPPKPAEIKPPGEALGMPPSS
FMPNEPSLMRMQNGGSFGDLHEVEL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttcatgtggaggatcagacggacgaggatttcttcgataaa
ttggtcgacgatgagttcgggcccaccactactactgccggatcgaaccctaagttgagc
gaggaaattgatcctaagttcgctgagggaagcgattccgacgaggcgaaagcgtttgcg
aatctgagcattagcgaggctgggaatcaattggatgagtcggttcgtggcggtggcggc
agcggcgaaggcggtgatgataatagaggctttgatttcaaagaaacaaaagaagaaaag
gcttgtgtggatggcggtgcaggtgcagagtcgttgggtgcacacgtggaagagagggat
tcgttggtttcggccaattcgattgggtgcgatagtgtggtaggatccagcaatgatggg
attggatccgaattcgcttcggattctactgtgagcaagagcagtggatccggcgggtct
ggggttaaggagattgggtggaattcgttccacacagatttggcccctcaaaatgggagt
cacgggtttggatcgtattcagattttttcagtgaattggatggtaattccggtgatttc
ccagggaatgtcggtggaaatttgaatagtgaggcaaaaatcataacgggcaatgaagga
tttgtagctgatggtgtgaataattcggttaattatgcgaattatcaagagggtcagggt
caggtttatggtgcaacggtggaacaaagttcaaatgtgcaggatttgagtagtagtcag
tattgggagaatgcctatccagggtggaagtatgacccgaataccggggaatggtatcaa
gtgggtggtgatgatggtaacacgaatgttcagaccagtgagtcgagtgctgttgctgat
ggaaatacggagatttctcatatgcagcaagctgctcagtctgttgtgggaactgcgact
gatactggcatgactgggagcttgtctaattggaatcaggtttcgcaagggaataacggg
actgagagtgtatctaactggaatcaggtttcgcaagcgaataacgggactgagagcgtg
tctaactggaatcaggtttcacaagtgaataatggatacccagaacacatggtttttgat
cctcagtatcccggttggtattatgacacaatcgcacaagaatggcgcacattggatact
tatacttcttcgattcaatcaacagctcagacccctgatcagcagcagcatcaaaacggg
tttgtgtcaactggtagttttaatgagattaatggtagcttatatggtgagtatgggcag
gctgacaattataggtcacagggttttggtagccaaggccaagatggaagctgggctggg
gcatatggtaataatcgtcagcaggaattgaattcgtggcaagctgaaactgttccaagg
agtgagggttttacaactttgggtggaaaccagcattttgatggttcttatgtgaacaat
gatcaacagaagtccttcaattcttttggaccagtttcatcttacaatggagcaagtcag
agtcatggtgaggctaatgggaatgttcaatttaaaagctctgtccctggtgggaacttt
agtcagcagtttagtcccgcaaatctgaagcttaatgagcaaacacaattctcggttgat
tactttggcagtcaacctgtaaatttttcccagcaatcatttgagagtgtccatcagact
tcttatgcttccaatgttggaagatcatctgctgggcgtcctccacatgccctggtaaca
tttggctttggtggaaaactccttgtaatgaagaatagtaatagttcactcagtagctcg
tcatttggaagccaggatccagtaggaagctcactttctgttctgaacttgatggaagtt
gtcttaggaaacgctgatgcttcaagccttggatcaggtgcctccaattattttcatgct
ttgtgccaacaatcatttcctggtccattagttggtgggagtgttggaggtaaagagttg
aacaaatggatagacgagaggattgcaagctgtgaattacccaacatggattatagaaaa
ggtgaagcattgaggttgcttctatctttgcttaagatagcttgtcaacattatggaaaa
cttcgatctgcttttggtgttgacaccattttgagggaaaatgattctccagaatcagca
gttgcgaaactttttgcatctgctaagaggaacagcatgcaattcagtgagtatggtgct
cttagccactgcttgcagaatttgccttctgaaggacaaattcgggcaaccgcttctgag
gtacaaaatcttctggtttctggtagaaagaaagaggctttacaatgtgcacaagaaggt
cagttgtggggacccgcacttgttcttgcttcacaacttggtgatcagttctatgttgac
actgtgaagcaaatggcacttcaccagctagttgcaggatcacctctaaggactttatgc
ctgctaattgcagggcaaccagctgaagtgttttattccgattccacaaccgacagcagt
cttccaggtgctgttaatatgcctcaacagcctgcacagattggggccacttgtatgcta
gatgactgggaggaaaatttggctgttataactgcaaacagaacaaaggatgatgaactt
gtaattattcatctcggcgactgcctttggaaggaaagaagtgagattactgctgcacac
atctgctatttaattgcggaagcaaactttgaaccatactcagacactgctaggctctgt
ctaattggagcagatcactggaaacttcctcgaacctacgttagtccagaagctattcag
aggaccgagttatatgaatattcgaaggtgcttggaaactctcagtttatcttgctacct
tttcagccatacaagctcatttatgcacacatgctagttgaagtggggaaggtttcagac
tcattgaaatactgtcaagcagtattgaagtctctgaagactggtcgagcacccgaagta
gaaacatggaaacagttaatattatctcttgaagaaaggatcagaactcaccaacagggt
ggatacagtgcaaattcggctcctggaaaattagttggcaaattgcttaacttttttgat
agtacagcacatcgtgttgttgggggtcttccaccacctgcgccaacattacaaggaggt
gttcctggtaatggacattataatcagccaactggccccagggtatcaagtagtcaatca
acaatggccatgtcatcgttaatgccttctgcatcaatggagcccataagtgattggatg
gctgatggtagtagaatgacaatggctaatagaagcgtttcagagccagactttggtaga
actccaagacaggttgattcatcaaaaggaatggcgtcaccaaatgaacaaggcaaagct
tcagtctcagggggggcatcacgctttcctcgttttaattttggctcacagttactgcaa
aagactgtggggctagttttaaggcctcgccctggcaaacaggctaaattgggtgaaacg
aacaaattctattatgatgaaaagctgaagagatgggtagaggaaggcgttgaagcccca
gctgaagaaactgccttgccaccccctccaacaactacagccttccagaatggcatgtca
gattacaatttgaaatctgcattacagaaagaagggactccaaacaatgggagcccagaa
tataaaactcctactccagaacattcatcaggaattccacctattccatccagctcaaat
caattctcatctcgtggaaggatgggtgttcgggcaaggtatgtggacaccttcaaccaa
ggtggtggaaagcctgcaaacttgttccagtcaccttctgttccatctgttaagcctcct
gttgctcccaatgcaaaattatttattcccaccccagcatcacttggtgaacagacaatg
gaggctatagcagaaaatgggcaagaagaaacttcaactaatgtagatcgctcaacatcc
attgcaaatgactcgttccagtctcctatacattcatcatcaatgaccgtgcagaggttc
ccaagcatggataacatcccatacatgggagatttgacaaaaggcaatggcaatggctcc
ctccctcctcactcacgaagaacagcctcatggggtggaagccacagcactccattcagt
cctccaaaaccggctgaaataaaacctccaggggaggcattgggcatgcccccatcatca
tttatgcctaatgagccttcattgatgcgaatgcaaaacggtggcagttttggggacctt
catgaagtggaactttga
DBGET
integrated database retrieval system
