Quercus suber (cork oak): 112028328 Help Entry 112028328         CDS       T05868                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism qsu  Quercus suber (cork oak) Pathway qsu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:qsu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112028328  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:qsu04121]     112028328 Enzymes [BR:qsu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      112028328 Ubiquitin system [BR:qsu04121]  Ubiquitin ligases (E3)   HECT type E3    112028328 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HECT Arm ARM_ARMC5 HEAT_2 Adaptin_N V-ATPase_H_C Motif Other DBs NCBI-GeneID:  112028328 NCBI-ProteinID:  XP_023916765 LinkDB All DBs Position Unknown AA seq 1555 aa AA seqDB search MGNRGQKRTEMVDELPADKRACSSLDFRPSSSNSSVQTHMNSTHSIHETHDNDMDTSSSA SASSRSEGEPERDSAYGSCDSDDAGQRRNNLRDYRDYQRQRSSGDHGKFKRILTSLSEES EPSGQLAALTELCEVLSFCTEDSLSSMISDSLAPLLVKYAKHESNPDIMLLAIRAITYIC DVYPRSSNFLIRHDAVPALCRLMVFEYVDVAEQCLQALEKISREQPLACLQAGAIMAVLN FIEFFPTSVQRVALSTVVNICKKLPSESPSRFMEAVPILCNLLQHEDRQLVEYVAICLIK IVEQVSQSSEMLDELCKNALIGQIVHLLDLNSRTTVSRPIYNGLIGILVKLSSGSIVAFK ALYELNISSILKDILSTYDLSHGMSSPHTVDGQCNQVYEVLKLLNELLPTSARDLDAQQM SDKEAFLVNCPSLLQKFGMDILPLLIQVVNSGANLYVCYGCLSVVNKLVYLSKSDMLLEL LKNANISSFLAGVFTRKDQHVLLVALQIAEMILQKLSDIFLNSFIKEGIFFAIDALLTQE NCSQLMFPVFSGIQLPFESSQKLASKEVLRCLCYAFATGQSATASETGSCKLEKDSVHNL AKHIKTNYFAPKLYDSEKGVTDILQKLRTLSTTLSDLVNMTIGNDVPAEPEERFYCILHQ IMANLNGRETISTFEFIESGITRSLLNYLSNSQYLREKCEGQGVNGHFIVVEKRFEVFAR LFLSSSEPHSVDLPLVVLIQKLQSALSSLENFPVILSHGSKQRNSYAMIPSGRRTLHPCL KVRFVRGDVETCLCDYSEDVQTVDPFCSLDAIEGYLWPKVSIKRNEHIESSSCAMGQTDS LPPDLPSNASAGPGESLPHMEHDSMSTDLPNMQEDDAKLSQSAPEEAVTEPVEQELHIPS DPDTNKEIQHPASCSEEDASPKLVFCLEEQQLDRTLTLYQTILHQQIKENEFITCSKLWS QVYTLTYKRAVEPIQNNSQEFIPSEENFIVPDNVRAYMQYTPFFSSMFGCELTSDLERSS PTYDILFLLKSLEGLARNAFHLMSRERVCAFAEGKIDNLDGLRVVVPSVPQNEFVSNKLT EKLEQQMRDSLSVSTGGMPSWCKQLMASCPFLFSFEARCKYFRLAAFGQLQIQSHQLSHS NSGPTSDRRPSSSSLPRKKFLVFRNQILDSAAQMMDLHARHKVLIEVEYNEEVGTGLGPT LEFYTLVSHEFQKSGLVMWREDHSSFASRTSLQAEDMAILMSPSGLFPCPWPSSLNTSDD RFSEVVKKFVLLGQVVAKSLQDGRVLDLHFSKAFYKLIIGQELTLYDIQSFDPELGRTLL EFQALVNRKKFLESVCKENSPPEFDSCFRNTRIEDLFLDFTLPGYPDYVLTSGADHKMVN MSNLEEYISLVVDATINSGISRQVEAFKSGFNQVFPIEHLQIFTEKELERLLCGEHDSWA FNELLDHIKFDHGYTSSSPPVVNLLEIIQEFDHGQRRAFLQFVTGAPRLPPGGLASLNPK LTIVRKHCGNWADIDLPSVMTCANYLKLPAYSSKEKMREKLLYAITEGQGSFHLS NT seq 4668 nt NT seq  +upstreamnt  +downstreamnt atgggtaatcgtggacaaaagcgtactgaaatggttgatgaattgccagctgataagagg gcgtgtagttcattggattttagacccagttcatccaactcctcagttcagacccatatg aactccacacattcaatacatgaaacccatgacaatgatatggacacttcctcttctgct tcggcttcaagccgatcagagggggaacccgagagggattcagcatatgggtcttgtgat tctgatgacgcggggcagaggcgtaacaatcttcgcgactatcgtgattatcagaggcag agatcttccggtgatcatgggaaattcaagaggattttaacaagtttgagtgaagaatcc gagccttcagggcaactggctgcgcttactgagttgtgtgaagtgttgtcgttttgtaca gaggattcactttcaagcatgatttccgactcattagctccacttcttgtaaaatatgca aagcacgagagtaatccggatataatgttgctggctataagggctataacttatatttgt gatgtgtatcctcggtcatctaatttcttaattaggcatgatgcagttcctgctctttgt cgattaatggtttttgagtacgtggatgttgctgaacagtgtttgcaagctttggagaag atatcacgggagcaaccacttgcttgcttacaggctggggcaattatggctgtcctaaat tttattgaattcttcccaacaagtgtacagagggttgctctatccactgtggtgaacata tgtaagaaacttccatcagaatctccttcacgttttatggaggctgttcccatactgtgc aatcttcttcagcatgaggatagacagcttgtcgaatatgttgctatttgcttgattaaa atagtggagcaagtaagtcagtcttccgagatgctggatgaactttgtaagaatgcgctg attggtcaaattgtacatcttctagacttgaatagccgaacaactgtatcccgacctatt tataatggtttgattgggatacttgtcaaactttcttctggttcaattgtagccttcaaa gctctatatgagctcaatataagcagcatattgaaggatatattatccacttatgacctc tcacatggaatgtcttctcctcatacagtggatggacaatgcaaccaggtatatgaagtt ctgaagttgcttaatgagcttctacctacttcagccagagatctagatgctcaacaaatg tcagataaggaagctttcttagttaactgccccagtcttctgcaaaaatttgggatggat atacttcccttgttgatccaggtggttaattctggtgcaaatttatatgtttgctatggc tgcctatctgttgtcaacaagttagtttatttgagcaaatctgacatgcttcttgaattg ctgaagaatgccaacatttcaagctttttggctggagtattcactagaaaggatcagcat gtgctattggtagccctacagattgctgagatgatcctgcaaaagctttctgatattttc ctgaattccttcatcaaggaaggtatcttctttgctattgatgcactgctaacacaagaa aactgttcgcagttgatgtttccagtattcagtggcatacagctaccgtttgaatcaagt cagaaattagcttcaaaggaggtcctgagatgcttatgttatgcttttgctactggtcaa tctgctacagcatcagaaactggtagttgcaagcttgaaaaggattctgttcacaatctc gcgaagcacataaagactaattactttgcaccaaaattatatgactccgagaaaggagtg actgatattcttcaaaagcttagaactttgtctactactttaagcgatttggttaacatg acaatcggtaatgatgttcctgctgagcctgaagagaggttttattgtatattgcatcaa attatggctaatcttaatggaagggaaaccatttccacttttgaatttattgaaagtggg attacgagatcactgctgaattacctatccaatagccagtacctaagagaaaagtgtgag ggtcagggtgtaaatggtcatttcattgttgtagaaaagcgatttgaggtgtttgcaagg ctgttcttgtcttcttcagagccccattctgtggacttgcccctagtggtgctgatacaa aaattacagagtgcactatcttctttggagaattttccagttattttgagccatggatcc aagcaaaggaactcttatgccatgattccaagtggacgccgcacactacatccatgtcta aaagttcgttttgtgcgaggagatgtagagacatgcctttgtgactattctgaagatgtt caaactgttgatcctttttgctctttggatgccattgaaggatatctgtggcctaaagtt agcattaaaagaaatgagcacattgagtcatccagttgtgctatgggccagacagatagt ctaccacctgatttaccatcaaatgcaagtgctggcccaggagaaagtttacctcacatg gaacatgacagtatgtccacagatttgcctaatatgcaggaagatgatgctaaattgtct cagtctgcacctgaagaagcagtcactgagcctgtggagcaagaattacacattccttca gacccagacaccaataaggaaattcagcatcctgcctcttgtagcgaggaagatgcttca ccgaaactggttttttgccttgaagagcaacagctggataggacactgacactataccaa acaattctccaccaacaaataaaagaaaatgaatttataacttgttcaaaattgtggagt caagtgtacactttaacatataaaagagctgtggaacctatccaaaataattctcaagaa tttattccgtctgaagaaaatttcattgttccagataatgtcagggcatatatgcaatac actccatttttctctagcatgtttggttgtgaactcacttctgacttggagaggtcaagt cctacttatgatatactatttctgctcaaaagcttggaaggcttggcccgaaatgcattt catctgatgtcccgtgaaagagtatgtgcttttgctgaaggaaaaattgataacttggat ggtctaagggtagtagttccttcagtgccacagaatgagtttgtaagcaataaattgaca gaaaaactagaacagcagatgcgggactctttgtctgtgtccactggtggtatgccttct tggtgtaaacagttaatggcttcttgcccttttctatttagttttgaggcaagatgcaag tacttccggttggcagcatttggtcaactgcaaattcaatctcatcaactgtctcatagt aattcagggcccactagcgacaggcggcccagctctagcagtttgccgcgtaagaagttt ttagttttccgcaaccagattctggactctgctgcccaaatgatggacctgcatgcacgt cataaagtgcttattgaagtggaatataatgaagaagttggtactggtcttggtccgaca ttggaattctataccctggtcagtcatgagttccagaagtctggcctagttatgtggagg gaggatcacagttcatttgcctccaggacaagcttacaggctgaggatatggcaattctg atgtcaccttctggacttttcccatgtccatggccatctagtttaaatacatctgatgac cggttttctgaagttgtgaaaaagtttgtccttttgggccaagtggttgcaaagtctctt caagatggaagggtcttggatcttcatttctctaaagccttttataaactcattattggc caggaacttactctctatgacatccagtcatttgatcctgagcttggtaggacattgcta gagtttcaggctcttgttaataggaaaaagtttttggaatctgtctgcaaagaaaattca ccacctgaatttgattcatgctttcggaataccagaattgaagatcttttccttgatttt actctccctgggtatcctgactatgtacttacttctggcgctgatcataaaatggttaat atgagtaacttggaggaatatatctcgcttgttgtggatgcaactataaacagtggaatt tctagacaagtagaagcttttaaatccggatttaaccaggttttccctattgaacatctt cagatttttactgaaaaggaactagagcgtttactatgtggagaacatgattcttgggct ttcaacgagctcctggatcatatcaagtttgatcatggatacacatccagcagtcctcca gtagtcaatttgctggaaatcatacaagagtttgaccatggacagcgacgagcatttctg cagtttgtgactggggcacctaggcttcccccgggaggtttggcgtctctcaatccaaag ttgacaattgttcgaaagcattgtggcaactgggctgacattgacctacctagtgtgatg acgtgtgcaaattatcttaagctgccagcttactcttcaaaagagaagatgagagagaag ctcttatatgccataacagaaggacaaggatcattccacttatcatag

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