Quercus suber (cork oak): 112028501
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Entry
112028501 CDS
T05868
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112028501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112028501
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112028501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
112028501
NCBI-ProteinID:
XP_065635531
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSYGEVVEAVIMKDRTTGRARGFGFVVFADPTVA
DRVIKEKHNIDGRMVEAKKAVPRDDQNILSRSSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLIKSFHELNGKMVEVKR
AVPKELSPGPSRSPLGNYYGLNRVNNLLNGYPQGYTPTTVGGYGLRMDGRFSPVSGGRSG
GFPPFGSGYGMGVNFEPGLSPGFGGSANFSSNLSYGRGLNPYYGSSNRFTSPLAYDGGNG
GSTSFFSSMTRNLWGSGGLNYGTSSASSSAYLGSGSGSIGGSTFGNTGVNWGSLGISAQG
GSNNAPNNSGNFGYGGGEDSYGLGTGGYGRNSGTNTAPTSSYAASTGGFDGDFADFYNSG
SVYGDTTWRSSNAERDGSGPFGYGLGGSAAPDASAKTSPSYVGGYSVNKRQSNRGHGLAC
DTK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatagtggcaagttatttattggtgggatatcttgggacacaaatgaagag
cgtctcaaggagtattttagttcatatggtgaggtggtagaagctgttattatgaaggat
cggaccacaggtcgtgctcgaggttttggctttgttgtttttgccgacccgactgttgcg
gatagagtcataaaggagaagcacaacatagatggaaggatggttgaggcaaaaaaggct
gttcctagggatgaccaaaacattttgagtagaagcagtggtagcatccatggctctccg
ggtcctggccgcactcgaaagatatttgttggaggtttagcatccacagtcacagagagt
gacttcaagaagtattttgatcagtttgggacaatcactgatgttgtggtgatgtatgat
cacaacacccagaggcctagaggctttggattcatcacttatgattcagaggaagcagtg
gacaaggttttgatcaagagttttcatgaactaaatggtaaaatggttgaggtcaagcgt
gcagttcccaaagagttatcacctggtcccagtcgcagcccacttggtaactactatggt
ctgaatagggtcaataacttactcaatggctaccctcaaggatatactccaactacagtt
ggaggatatggacttaggatggatggtagattcagtccagtttctggcggccgaagtggt
ggttttcctccatttggttctggttatggaatgggtgtgaattttgagccagggttgagc
ccaggttttggagggagtgcaaattttagtagtaatctcagctatggacggggattgaat
ccttattatggtagttcaaataggtttactagtccacttgcatatgatggtggtaatgga
ggaagtacttcctttttcagctctatgactcggaatctgtgggggagtggggggcttaat
tatggcacaagctctgcaagttccagtgcatacctgggatcaggaagtgggagcattggg
ggaagcacatttggtaatactggagttaattggggttctttgggaatctctgctcaaggt
gggagtaacaatgcccctaacaatagtggaaattttggttatggaggtggtgaggacagt
tatggcttgggaacgggagggtatggaagaaacagtggtaccaatacggccccaacatca
tcttatgctgcatcaacaggtggttttgatggggactttgcagacttctataatagtggt
tctgtatatggggacaccacttggcgatcatcaaatgctgaacgagatgggtctggtccc
tttggttatggacttggcggcagtgcagctcctgatgcttctgctaaaacttctcctagt
tatgttggtggttatagtgttaataagagacagtcaaatagaggtcatggactagcatgt
gacactaaatga
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