Quercus suber (cork oak): 112029642
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Entry
112029642 CDS
T05868
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112029642
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112029642
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
112029642
NCBI-ProteinID:
XP_023918098
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAVSMKWVGLCLMVVLVLFVGTIAKVRNDQISETSNVEVEREQVQSSSNSTMASSLEKVE
GKNEHAVDDPEEIASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPNWHKNRKRLAD
CGIGFGRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQEEPLWIVFKRDMVIQLKQ
ELIMNSFKTIDGRGVNVHIANGACITIQYVTNIIVHGLHIHDCKPTGNALVRSSPSHYGW
RTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTSITISNNHFTHHNEVMLLGHS
DSYIRDKQMQVTIAYNHFGEGLMQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYAAPTNPFAKEVTKRVETAASQWKGWNWRSEGDMMLNGAYFTPSGAGASASYARASS
LGAKSSSMVASITSGSGALPCRRGHQC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtctatgaaatgggttggtctttgtttgatggttgtgttggtgttgttcgtt
gggacaatagcaaaggtacggaacgaccagatctcggaaactagcaatgtggaagtggaa
agagaacaagtgcaaagctcaagcaattcaacaatggcgtcgagtttggaaaaagttgag
ggcaagaatgagcatgcagtggatgacccagaagagattgcttcaatggttgacatgagc
atccgcaacagtactgaaagaaggaagctaggcttcttctcatgtggaactggtaatccc
attgatgactgctggcgttgtgatccaaactggcacaaaaaccgcaagcgccttgcagac
tgcggcattggatttggcagaaacgccattggtggccgcgatggacgcttctatgtcgtg
actgactccggtgatgatgaccctgtgaaccccaggcctggcacattgcgccatgctgtt
atccaggaagagcctctgtggattgtgttcaagagggacatggtgattcaattgaagcag
gagcttatcatgaacagctttaagaccattgatggtcgtggggtcaatgtccacattgcc
aatggtgcttgcatcactatccagtatgtcactaatattatcgttcatggtttacacatc
catgactgtaagcctactggcaatgccttggtgaggagctctccaagtcattatgggtgg
aggactatggctgatggggatgctgtttccatttttggttcaagtcacatatgggttgat
cacaattctctctctaattgtgctgatggccttgttgatgctgtcatgggctcaacttca
attaccatttccaacaaccatttcacccaccacaatgaggtgatgctgttgggccacagt
gattcttacatacgagacaagcaaatgcaagtgaccatcgcatacaaccattttggagag
ggacttatgcagagaatgcctaggtgtagacatgggtacttccatgttgtgaacaatgac
tacactcactgggagatgtatgccattggtgggagtgcaaatcctaccatcaatagccag
ggcaacagatatgcagcaccaacaaacccttttgcaaaagaggtgactaagagggtcgaa
accgctgcaagccagtggaagggctggaattggaggtcagagggagatatgatgttgaat
ggtgcctatttcactccatcaggagctggagcttcagccagttatgctagggcctcaagc
ttgggagccaagtcttcttctatggtcgcctccattacttccggttctggtgcacttccc
tgccgtagaggccaccagtgctag
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