Quercus suber (cork oak): 112030020
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Entry
112030020 CDS
T05868
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112030020
Spliceosome [BR:
qsu03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112030020
Other components
Complex C specific factors
112030020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
112030020
NCBI-ProteinID:
XP_023918473
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MELIEKFAQWIDDYDDDYSFGVSKRCRLDGDIYKKAKPMNFISTGTQKIDNNGGFAGLGF
TEEEEEDFLPTAFGKMIKEGALKRMREKEKSKGKRTRDDGGGFGFASVGGEFEKHTKGIG
MKLLQKMGYKGGGLGKNAQGIVTPIEPKLRPKNMGMGFNDFNETEDKKKKKKKGLMGSEC
VGVERVKEKRLWSTKKKKVEDEEEKFVTEAERQLYSMVEILNVLDQLEEDNSTGELTLDS
LAELFIQLKSRFAEDYKLCNLSVIACSYALPLFIRVFQGWDPLQNPFHGFEIVSLWKSLL
LSDQEFTATPYSQLISQVLLPAVRLSVNNTWQAREPEPMLRFLDSWQKLLLPSVLHYILD
YIVMPKLNSAVGCWEPLRETVPIHLWVHPWLQYLGHKLEGIFETIRFKLSQVLVAWHPSD
ASAYTILSPWKAVFDSASWEDLMSRFIVPKLQLILQEFQLNPANQKLDEFHWVMKWASDI
PSHLMVVMMVRFFFSKWQQVLYHWLQASPDFAEITNWYLGWKELLPKELLANESIRYQLN
RGLEMMNQAVEGLEVVQPGLEENIGYFRVPEQRQFEAQQKAVIQQAAVSFSMDDMSVKEV
IEAHAQQHGLLFNPKPGRRHDGHQIYAFGNLSVIIDALNQKVYAQTEEGWSLVSLQDVVD
KHHSSLS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatagagaagttcgcccaatggatcgacgactacgacgacgattactccttt
ggagtatccaaaaggtgtcgcttagatggagatatttacaaaaaagccaaaccgatgaac
ttcatctccaccggaacccagaaaatcgataacaatggcggctttgctggtcttggattt
actgaggaggaggaggaggattttttgccaacggcgtttgggaagatgattaaagaggga
gccttgaagaggatgagagagaaggaaaagtctaagggtaagagaactagagacgacgga
ggtggttttggttttgcaagtgttggtggtgagtttgagaagcacaccaaagggattggt
atgaaactgttgcaaaaaatggggtacaaaggcggtggccttgggaagaatgcacagggg
attgtcactccgatcgagcccaaactgcgccccaagaacatgggtatgggctttaacgat
ttcaacgagacagaagataagaagaagaagaagaagaagggtttgatgggcagtgagtgt
gtgggtgtagagagagtgaaggagaagcggttgtggtcgacgaagaagaagaaggtggag
gatgaagaggagaagtttgttaccgaggctgagcggcagttgtatagtatggtagagata
ttgaatgtgttggatcaattggaggaagacaattccacaggtgagttgacattggattca
cttgccgagctattcattcagttgaagagtagatttgccgaggattataagctctgtaac
ttgtctgtcattgcctgctcatatgctctgcctttgtttattagagttttccagggatgg
gaccctcttcaaaatccctttcacggctttgagattgtgtctctgtggaagagtctactt
ctgagtgatcaagagtttactgctacaccttattcccagttgatatcccaagttctttta
ccagctgttagactttctgtcaacaatacttggcaggctagggaacctgaaccaatgcta
cggttcctggattcttggcaaaagttgttactcccttccgtcctccactacatactggat
tacattgtcatgccaaagttaaatagtgcagttggctgttgggaacctttacgcgaaact
gttccaatccacctttgggtgcacccgtggttacagtatttgggacacaaattggaaggt
atattcgagactatacgtttcaagttgagtcaagttcttgttgcttggcacccaagtgac
gcgtctgcctatactattttgtctccttggaaggccgtgtttgattcagcgagttgggaa
gaccttatgagcagatttatcgttccaaagttgcagcttattctgcaggagttccaacta
aaccctgcaaatcagaagcttgatgagtttcattgggttatgaagtgggcctctgatatt
ccaagccatcttatggttgttatgatggtgaggttctttttttccaagtggcaacaggtt
ttgtatcattggttacaagcaagcccagactttgcggagataacaaattggtatttggga
tggaaggagcttcttccgaaggagcttcttgcaaacgaaagtatccggtatcagcttaat
cgtggtcttgagatgatgaaccaggctgttgaaggtttggaggtggtccaacctggtttg
gaagagaacattggctattttagggtacctgagcaaaggcaatttgaggctcagcagaaa
gcagtaatacaacaagctgccgtgagttttagcatggatgatatgagtgttaaggaagtt
attgaagcccatgcccaacaacacggcttactattcaaccctaaaccaggccggaggcat
gatggtcaccagatctatgcctttggtaatttgagtgtgataattgatgctctaaatcaa
aaggtgtatgctcaaactgaggaagggtggtcccttgtatcccttcaagacgtagtggac
aagcaccatagttctctttcctag
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