Quercus suber (cork oak): 112030451
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Entry
112030451 CDS
T05868
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112030451
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Paralog
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
112030451
NCBI-ProteinID:
XP_023918906
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Position
Unknown
AA seq
685 aa
AA seq
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MSGGGCSIVWFRRDLRLEDNPALQAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLNHSL
AHLDSSLRSLGTSLITKRSTDTISSLLEVVKSTGASQVFFNHLYDPLSLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVNDAHGRPFTTFAAFWERCLSMPYDPESPLLPPMRIVSGDV
SRCPSDALVFEDESEKGSNALLARAWSPGWSNADKTLTTFINGPLIEYSKNRRKADSNTT
SLLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNQAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKYFPWVLNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARIPTEWIHHPWNAPEPVLQAAGIELGSNYPLPIVGIDAAKARLQEA
LSEMWQQEAASRAVIENGTEEGLGDSSESTPIAFPQDIQMAENHEPVRNNPPTTIRRYED
QMVPSMTSSLVRVEEEEPSLDIQNLAADSRAEVPTDGHVNQEATRNTLNPAVVQNVHSHN
LPQFNTPIVLRNAAEDSTAESSSSIRRERDGGVVPVWSPSTSSYSEQFVGDENGIGTSSS
YLQRHPQSHQIVNWRRLSQTGTYTH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagcatagtatggtttagaagagatctgagactagaagataac
ccagctttgcaagctggagtgagagcaggtgctgtggttgctgttttcatatgggcacct
gaagaggaaggccactactaccctggaagagtttcaaggtggtggcttaatcacagtttg
gctcaccttgattcctctttgagaagccttggcacttctctcatcaccaaaagatccact
gacaccatttcttctctacttgaggttgttaagtccactggtgctagtcaagtcttcttc
aaccacttatatgatcctttgtcacttgttagggatcaccgtgcaaaggaggttttaaca
gctcaaggcatagctgttcgttccttcaatgcagatttgctctatgaaccttgggatgtt
aatgatgcccatggccgcccattcacaacttttgctgccttttgggaaagatgcctcagc
atgccttatgacccggagtctccacttcttccacccatgaggatagtttcaggtgatgta
tcaaggtgcccttctgatgccttagtgtttgaggatgaatcagagaagggaagcaatgca
cttcttgctcgagcatggtcgcctgggtggagcaatgctgataagactctgactacattc
atcaatggaccattgatagagtattctaaaaatcgcagaaaagctgatagcaatacaacc
tcacttctctctccccacttgcattttggggaggtgagtgtgagaaaagtatttcatctt
gtccgtatcaagcaggttctgtgggccaatgaaggcaaccaggctggggaagagagtgtc
aacttgtttctgaaatctattggtcttagagaatattctaggtacttgagttttaaccat
ccatatagtcacgaaaggcctcttcttgggcaccttaagtacttcccttgggtcttgaat
gaaggttattttaaggcatggagacaaggtagaactggttatccattggtggatgctggc
atgagagagttatgggccactggctggctgcatgatcgaatacgagtagtggtttctagt
ttttttgtcaaggttctgcaacttccgtggagatggggaatgaagtatttctgggataca
ctcttagatgcggatcttgagagtgatgctcttggttggcagtatatatctggtactctg
cctgatggccgtgaatttgaccgcatagataatccacagtttgaaggttacaagttcgac
cctcatggagaatatgtacgacgttggcttcctgaacttgctaggataccaactgaatgg
atacaccacccatggaatgcaccagaacctgtcctccaagctgctggaattgagctgggg
tcaaactaccctcttcctattgtagggatagatgcagcaaaagccaggttgcaagaagca
ctatcagagatgtggcaacaagaagcagcttcaagagctgtaattgaaaatggaactgag
gaagggcttggagactcctctgaatcaaccccaattgcctttcctcaagatatacaaatg
gcagagaatcatgaaccagtgaggaacaacccccctaccacaattcggcgttatgaggac
cagatggtcccaagcatgacttcttctttggtgagagtggaagaggaagaaccttctttg
gatattcaaaatttggcagcagatagcagagctgaagtcccaaccgatggacatgtaaat
caagaagcaacaagaaacacattaaacccagcagttgttcagaatgttcatagccacaat
cttccacaatttaatactccaatagtgctgaggaatgctgctgaagactccacagcagaa
tcttctagtagtattaggagagagagggatgggggtgtagttccagtttggtctccttca
acctctagttactcagagcagtttgtaggtgatgaaaatggtattggaactagttcatcg
tacttgcagaggcatcctcagtctcaccaaatagttaattggaggcggctatctcaaact
ggaacatatacgcactag
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