KEGG   Quercus suber (cork oak): 112030451
Entry
112030451         CDS       T05868                                 
Name
(RefSeq) cryptochrome-1 isoform X1
  KO
K12118  cryptochrome 1
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    112030451
SSDB
Motif
Pfam: FAD_binding_7 Cryptochrome_C DNA_photolyase
Other DBs
NCBI-GeneID: 112030451
NCBI-ProteinID: XP_023918906
LinkDB
Position
Unknown
AA seq 685 aa
MSGGGCSIVWFRRDLRLEDNPALQAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLNHSL
AHLDSSLRSLGTSLITKRSTDTISSLLEVVKSTGASQVFFNHLYDPLSLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVNDAHGRPFTTFAAFWERCLSMPYDPESPLLPPMRIVSGDV
SRCPSDALVFEDESEKGSNALLARAWSPGWSNADKTLTTFINGPLIEYSKNRRKADSNTT
SLLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNQAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKYFPWVLNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARIPTEWIHHPWNAPEPVLQAAGIELGSNYPLPIVGIDAAKARLQEA
LSEMWQQEAASRAVIENGTEEGLGDSSESTPIAFPQDIQMAENHEPVRNNPPTTIRRYED
QMVPSMTSSLVRVEEEEPSLDIQNLAADSRAEVPTDGHVNQEATRNTLNPAVVQNVHSHN
LPQFNTPIVLRNAAEDSTAESSSSIRRERDGGVVPVWSPSTSSYSEQFVGDENGIGTSSS
YLQRHPQSHQIVNWRRLSQTGTYTH
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgtcaggtggtgggtgtagcatagtatggtttagaagagatctgagactagaagataac
ccagctttgcaagctggagtgagagcaggtgctgtggttgctgttttcatatgggcacct
gaagaggaaggccactactaccctggaagagtttcaaggtggtggcttaatcacagtttg
gctcaccttgattcctctttgagaagccttggcacttctctcatcaccaaaagatccact
gacaccatttcttctctacttgaggttgttaagtccactggtgctagtcaagtcttcttc
aaccacttatatgatcctttgtcacttgttagggatcaccgtgcaaaggaggttttaaca
gctcaaggcatagctgttcgttccttcaatgcagatttgctctatgaaccttgggatgtt
aatgatgcccatggccgcccattcacaacttttgctgccttttgggaaagatgcctcagc
atgccttatgacccggagtctccacttcttccacccatgaggatagtttcaggtgatgta
tcaaggtgcccttctgatgccttagtgtttgaggatgaatcagagaagggaagcaatgca
cttcttgctcgagcatggtcgcctgggtggagcaatgctgataagactctgactacattc
atcaatggaccattgatagagtattctaaaaatcgcagaaaagctgatagcaatacaacc
tcacttctctctccccacttgcattttggggaggtgagtgtgagaaaagtatttcatctt
gtccgtatcaagcaggttctgtgggccaatgaaggcaaccaggctggggaagagagtgtc
aacttgtttctgaaatctattggtcttagagaatattctaggtacttgagttttaaccat
ccatatagtcacgaaaggcctcttcttgggcaccttaagtacttcccttgggtcttgaat
gaaggttattttaaggcatggagacaaggtagaactggttatccattggtggatgctggc
atgagagagttatgggccactggctggctgcatgatcgaatacgagtagtggtttctagt
ttttttgtcaaggttctgcaacttccgtggagatggggaatgaagtatttctgggataca
ctcttagatgcggatcttgagagtgatgctcttggttggcagtatatatctggtactctg
cctgatggccgtgaatttgaccgcatagataatccacagtttgaaggttacaagttcgac
cctcatggagaatatgtacgacgttggcttcctgaacttgctaggataccaactgaatgg
atacaccacccatggaatgcaccagaacctgtcctccaagctgctggaattgagctgggg
tcaaactaccctcttcctattgtagggatagatgcagcaaaagccaggttgcaagaagca
ctatcagagatgtggcaacaagaagcagcttcaagagctgtaattgaaaatggaactgag
gaagggcttggagactcctctgaatcaaccccaattgcctttcctcaagatatacaaatg
gcagagaatcatgaaccagtgaggaacaacccccctaccacaattcggcgttatgaggac
cagatggtcccaagcatgacttcttctttggtgagagtggaagaggaagaaccttctttg
gatattcaaaatttggcagcagatagcagagctgaagtcccaaccgatggacatgtaaat
caagaagcaacaagaaacacattaaacccagcagttgttcagaatgttcatagccacaat
cttccacaatttaatactccaatagtgctgaggaatgctgctgaagactccacagcagaa
tcttctagtagtattaggagagagagggatgggggtgtagttccagtttggtctccttca
acctctagttactcagagcagtttgtaggtgatgaaaatggtattggaactagttcatcg
tacttgcagaggcatcctcagtctcaccaaatagttaattggaggcggctatctcaaact
ggaacatatacgcactag

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