Quercus suber (cork oak): 112030658
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Entry
112030658 CDS
T05868
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112030658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112030658
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
112030658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HSBP1
Motif
Other DBs
NCBI-GeneID:
112030658
NCBI-ProteinID:
XP_023919090
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MIMEEGREREGGKVLSLIEKATNSTAAEVDPRLLKAIKSVVRYSDTELRLAANTLLDLMK
RDHSQVRYLTLLIIDQLFMRSKLFRSILVDNLDQLLSLSVGFRRTQPLPAPPAVASILRS
KAIEFLEKWNSSFGIHYRQLRLGFDYLKNTLKLQFPNLQANAARIQQERAERERRSREIL
LKKFEMFKDNFSSIKEEIMSTIDEIGECLDIVRTNEEFMPLPPADDEYFEEFRSSELLQI
RLNTLKEGEKVHENTDNKVVFDALRELYKLLETKHFVSVQEWISVLLRVEVADNRFRDSA
LKELIDIQNRLKSVKKKCEESGCALPNTANRDEEEDDFWEEGKIGSLENERSTVPNNHDS
MKLTSNKFKNKTPESSKKDCNDNEILSPEGAETNLDPLRSKLLAEAPVMRWGSFLDNWGS
HRKVLANQRGLELESHWGRVDYDAVIPAEKMPELNVHASLYEEQQTDIQPCRAPLSKGGL
CQRRDLRVCPFHGPIIPRDDEGKPLNQNSLKEEISLDLGIDSIEQLAKQAVKNVREKAKE
VANKREIDKKSLKRAKLAKIREHNETVLRDAALTSTSRSASIGEDMGVTDGEKPSARNKK
ETLSSMLHKKVTPKDRIAQRLLNTRAKDSTTRQLKLGEDANYREAFPNQW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaagaggggagagagagagaaggagggaaggtgttgagtctgatagagaag
gcgaccaactccacagctgctgaggtggacccacgtctccttaaggctatcaaatctgtt
gtccgctattcggatacggagctccgactcgccgccaatacccttttggatctcatgaag
cgcgaccactctcaggtaaggtacctgacactcctgataattgaccaactgttcatgcgt
tcgaagcttttcagaagcatccttgttgacaacttggatcaattgctgagtttgagtgtt
gggttcagaagaacccagcctctcccggctcctcctgctgttgcttctattttgcgctct
aaggcaatcgaattcttggagaagtggaactcttcctttgggattcattacaggcagctc
agattagggtttgattaccttaaaaacaccctcaagttgcagtttcctaatctacaggcc
aatgcagctcggattcagcaggagagagcagaacgtgaaaggcggtcaagagagattttg
ctaaagaaatttgaaatgttcaaggacaatttctcatctattaaggaagagatcatgtct
accattgatgagattggggaatgcttagacatagtccgtacaaatgaggaatttatgcct
ctgcctcctgcagatgatgaatattttgaagagtttcgttcttctgaactgctgcaaatc
cgtctcaatactttaaaagaaggggagaaggttcatgagaacactgacaataaagtggtt
tttgatgcattaagggagctgtacaagcttctagagacaaagcattttgtttcagttcaa
gaatggatttctgttcttctaagggttgaagtggcagacaacaggttcagagattccgct
ttaaaggagttaattgatatacaaaatcgtctcaaatcagtgaagaagaagtgtgaagaa
tcaggttgtgctcttccaaacactgcaaatcgtgatgaagaagaagatgatttctgggag
gagggtaagattggatcacttgagaatgagagatctactgttcccaataatcacgattcc
atgaaattaacttctaataagttcaaaaataaaactcctgaaagcagtaaaaaagattgt
aatgacaatgagattctcagtcctgaaggtgctgaaaccaatttggaccctttaagaagt
aagcttctggctgaagctcctgtgatgaggtggggctctttcttggataactggggttca
cacaggaaggttttggctaaccagcggggattggagcttgaaagtcactggggtagggtg
gactatgacgcggttattccagctgagaaaatgcccgaactgaatgtacatgcatctctt
tatgaagagcagcaaactgacattcaaccctgcagggctcctttgagcaaagggggactt
tgtcagagaagagacctgagagtttgtccatttcatggacctattatacctcgagatgat
gaaggaaagccactcaatcaaaactctttaaaagaagagatatctcttgatttggggatc
gattccattgagcagttagcaaaacaagctgtgaagaatgttcgtgagaaagctaaagaa
gtagcaaataagagagaaattgataaaaagtcactgaagcgtgcaaagcttgcgaaaatt
cgggagcacaatgaaacggttctaagggatgctgccttgacatcaacttcaagatctgca
tctattggagaagatatgggggtgactgatggtgagaaaccatcagccagaaacaagaag
gaaacactctcatccatgctgcacaagaaagtgacaccgaaagataggatagctcaaagg
cttttgaatacacgggcaaaggattcaacaacaagacagctcaaattgggtgaagatgca
aattaccgagaagccttcccaaatcaatggtaa
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