Quercus suber (cork oak): 112031650
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Entry
112031650 CDS
T05868
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112031650
03036 Chromosome and associated proteins [BR:
qsu03036
]
112031650
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112031650
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112031650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
112031650
NCBI-ProteinID:
XP_023920120
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MGKNVVSDEEDELEVEDEDEREHVDGRGGGRNEDEEDEEDEEGQDEYEKDGFIVDDVDEE
EEHDEEERADSDEERQRKKKRKKKENYTLDEDDYELLEDNNITIPRWKQSKKFKRLKKAQ
GVSEEPSGLSDEEEMFGSGKGGRTAEEKLKRSLFGDDEVGAPLEDIAEEEEQAEDEEDGD
IGEEDEMADFIVDEEDEHGAPPKGGRRPKKGGNRRAPGVSSSALQEAHEIFGDVDELLQL
RKQGLDSTEWRERRLEDEFEPIVLSEKYMTEKDDQIKELDIPERMQISEESTGSPPLDDS
IVEETAWIYNQLQSGTVPLFGKRGTGTVKEGGDLSIKKDDIMRFLDLLHVQKLDIPFIAM
YRKEECLSLLKDPEQPEDDDENQDKNEKTPTLKWHKVLWAIQDLDRKWLLLQKRKSALQS
YYNKRFEEESRRVYDVTRLNLNQQLFDSIMKSLKAAGSEREVDDVDSKFNLHFPSGEVGV
DEGQYKRPKRKSLYSICSKAGLWEVANKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEM
ASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSNFMDHAVVSTCPTPDGNLAID
SFHQFAGVKWLREKPLSAFDDAQWLLIQKAEEERLLQVTVKMPERDLEKLINEFNEYYLS
DGVSKSAQLWNEQRKLILQDALFGFLMPSMEKEARSLLTSRAKNWLLMEYGNVLWNKVSV
GPYQRKETDINSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVN
DQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEIIFKMVEENPRDVGHEMD
GLSIVYGDESLPRLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMIATLCGPGREIL
SWKLSSLENFLNPDEKYGIIEQVLVDVTNQVGVDINLAISHEWLFAPLQFISGLGPRKAA
SLQRSLVRAGAIFTRKDFVTVHGLGKKVFVNSVGFLRVRRSGLAASSSQFIDLLDDTRIH
PESYNLAQELAKDVYDEDIRGDTNDDDDALEMAIEHVRDRPSILRSLDVDEYANGKNRAN
KRETFYDIKRELMQGFQDWRKQYEEPSQDDEFYMISGETEETLAEGRIVQATVRRVQGQK
AICVLESGLTGMLMKEDYSDDWREAELSDRLHEGDILTCKIKSIQKNRYQVFLVSKESEM
RSNRLQYVRNADPYYHEDRSRLQSEQDKARKEKELAKKHFKPRMIVHPRFQNITLDEAKE
FLSDKDPGESIISPSRHGPSHLTLTLKVYDGVYAQKDIVEGGKEHKDITSLLRIGKSLKI
GEDTFEDLDEVMDRYVDPLVSHLKAMLSYRKFRKGTKAEVDELLRIEKSENPTRIVYCFG
ISHEHPGTFILTYVRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQSAQS
LRSIAARVPMRSPATGGSSGASGGSGWGGSTDEDNWRGQSYDRDRSSTPGSRTGRNDYRN
GGGRDGHPSGLPRPYGGRGRGRGSYNSSRGNSSGNERQDSGYDAPKWDSTTKDGEDGWGS
FPGAKVQNSPGREAFPGGWGGSGSGSGGGNSWGGGASGNENAGWGDAGTNDAGTENGGSS
WGTAPKRSSSQSQAGNGWSGGSGGGGGGGGW
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacgtagtctctgatgaagaagatgagctcgaggtcgaggacgaggacgag
agggaacacgtcgatggtcgtggcggtggtcgcaatgaggatgaagaggacgaagaagat
gaagaagggcaggatgaatatgagaaggatggatttatagtggatgatgttgatgaagaa
gaggagcatgatgaagaagagagggcagacagtgatgaggagaggcagaggaagaagaag
cggaagaaaaaagagaattatacacttgatgaagatgactatgagctcttggaggacaac
aatataaccattccccgttggaagcagagcaaaaagtttaagcggctgaaaaaggctcag
ggggtttccgaggagccctctggattatctgatgaggaggagatgtttggaagtggaaaa
ggtgggagaactgcagaggagaagcttaagcgtagtttatttggtgatgatgaagtaggt
gctccgcttgaggacattgctgaagaggaggaacaagcagaagatgaagaggatggagac
attggtgaggaggatgaaatggctgactttattgtggacgaagaagatgagcatggagct
cctcccaaaggggggaggcggccaaagaaaggagggaataggagggcacctggagtttcc
tcatcagctttgcaggaagctcatgaaatattcggtgatgttgatgaactcctgcagctc
cgtaagcaaggtttagattctactgaatggagggaaaggaggctggaagatgaatttgaa
ccaattgttctttctgagaagtatatgacagagaaggatgaccagattaaggagcttgac
atcccagaaagaatgcagatatctgaggagagcactggttctcctccgttggatgatagt
atagttgaagagaccgcttggatatataatcaactccaaagtggtacagtacctttgttt
ggcaagagaggcacagggactgttaaggaagggggggatctgtctattaagaaagatgat
atcatgagatttttggacctactgcatgtgcaaaaactagatatcccctttattgctatg
tatcgaaaggaggagtgcctaagtctcctgaaagatcctgaacagccggaagatgatgat
gaaaatcaggataagaatgagaagacacctactctaaagtggcacaaggtactttgggca
attcaagacttggatagaaagtggctgctgcttcagaagcgaaagagtgctcttcagtca
tactacaataagagatttgaggaagaatctcggcgtgtatatgatgtaacaagactcaat
ttaaatcagcaactctttgactcaattatgaagtcactcaaggcagcaggatcagaaagg
gaggttgatgatgttgactccaagtttaacttacatttcccttcgggtgaagtgggagtg
gatgagggacaatacaagaggcccaagaggaaatcactatatagtatttgcagtaaagct
ggtctatgggaggttgcaaacaagtttggttacagctctgagcaatttggattgcagcta
tcattagaaaagatgagaaatgatgagttggaggatcctaaggaaacacctgaggagatg
gcttctaactttacatgtgcaatgtttgagacacctcaagctgtgcttaaaggagctagg
cacatggcagctgtggagataagttgcgagccatgtgttaggaaacatgtccgtagcaac
tttatggatcatgctgtggtatcaacttgtccaacacctgatgggaatttggcaatagat
tctttccatcagtttgcaggggtgaagtggttgcgcgagaagcctcttagtgcatttgat
gatgcacaatggctcctcattcagaaggctgaagaggagaggcttcttcaggttacggtt
aagatgccagaaagggatttggagaagttaataaatgaatttaatgagtattatcttagt
gatggtgttagtaaatctgctcaactatggaatgagcagaggaaattaatattgcaggat
gcactttttgggtttcttatgccctccatggagaaagaagcaagatctttgttgaccagt
agagcaaaaaactggttacttatggagtatgggaatgttttgtggaacaaagtttctgtg
ggtccatatcaacggaaggaaactgatattaattcagatgaagaagctgcaccaagggtc
atggcttgctgttggggtcctggaaagccagctactacctttgtaatgttagattcatca
ggtgaggtgctggatgtgctttacactgggtccctcactttgcggtcccaaaatgtgaat
gaccagcaacgtaagaaaaatgatcaggaacgtgtattgaagttcatgacagatcaccaa
ccacatgttgttgttttaggagctgtaaatctatcttgtacccgattgaaggaggatata
tatgagattattttcaagatggtggaggaaaatcccagagatgtcgggcatgagatggat
gggttaagcattgtatatggggatgagagtctacctcgcctttatgagaactctcggatt
tcatctgaccagctacctgggcaatcaggcattgttaaacgggctgtcgctcttgggcga
tatttgcaaaatcccttggcaatgattgcgacgctatgtggaccgggaagggagatctta
tcatggaaacttagttcgctagagaactttttaaacccagatgagaaatatggaattatt
gaacaggttttggtagacgtaacaaaccaagtgggtgttgacattaatttggctatcagt
catgaatggttgtttgctcctctacaatttatttctgggcttggtcctaggaaggcagca
tctctgcagaggtccttggtgagagctggggcaatatttactcggaaggactttgtcacg
gtgcatggacttggtaaaaaggtgtttgtcaattcggttggtttcttgcgtgtccggcgg
agtggattggctgctagcagcagccagttcattgatttgctagatgatacaagaatacat
ccagaatcttataatcttgcacaagagttggccaaagatgtttatgacgaggacataaga
ggtgacacaaatgatgatgatgatgcgctggagatggcaatagagcatgttagagatcga
cctagtattttgagaagccttgatgttgatgaatatgctaatggcaagaaccgtgcgaat
aaaagggaaactttttatgacataaaaagggaacttatgcagggatttcaggattggcgt
aagcaatatgaagagcctagtcaagatgatgaattctatatgatttcaggtgaaactgag
gagacccttgctgagggaagaattgtgcaagccactgtccgtagggtacaaggtcaaaaa
gcaatttgtgtgcttgaatctggtttgactgggatgctcatgaaggaagactattcagat
gactggagggaggctgagttgtctgacaggctacatgaaggtgacattctcacttgcaag
attaagtcaattcaaaagaataggtaccaggtgttcctagtttctaaagagagtgagatg
cgaagtaaccgacttcagtatgtcagaaacgctgatccatactaccatgaagaccgaagc
aggctacaaagtgagcaagacaaagctcgcaaagaaaaggagcttgcaaagaagcatttt
aagccaaggatgattgttcatccccgcttccagaatattaccttagatgaagcaaaggag
ttcttgtctgacaaggatcctggcgaaagtatcatcagtcccagtcgccatggaccttct
catctaactctaactctcaaagtttatgatggagtttatgctcaaaaggacatagttgaa
ggtggaaaggagcacaaggacatcacaagcttacttcgtattgggaagtcattgaaaatt
ggggaggacacttttgaggatttggatgaggtgatggatagatatgttgatcccttggtg
tctcacttgaaagcaatgctaagttatcgaaagttcaggaagggcacaaaagcagaagtt
gatgaactcctaaggattgagaaatcagaaaatcctacaaggatagtttattgttttggc
atctcacatgagcatccaggcaccttcatcctgacctatgtaaggagtacaaatccacac
catgagtatattggtttatatccaaagggatttaaattccggaaaaggatgtttgaggac
attgatcggcttgtagcatacttccagagacatattgatgatcctcagtcagcacaatct
ctcagatcgattgctgctagggtgccaatgcgaagccctgcaactgggggctcttcaggg
gcatctggaggtagtggctggggtggttcaaccgatgaggataattggaggggtcaatct
tatgacagggatcgatcttctacacctggttcaagaacaggccgaaatgattatagaaat
ggaggtggccgagatggacatccaagtggattgcctaggccatatggtgggcgcggacgt
ggtcgaggttcgtataacagcagcagaggaaatagttccggcaatgagaggcaagattct
ggttatgatgcccctaaatgggattcgactaccaaggatggagaagatggttggggcagt
tttcctggtgctaaagttcaaaactcaccaggcagggaggctttcccaggtggttggggt
ggtagtggcagtggcagtggtggtggtaatagttggggtggtggagctagtggcaatgaa
aatgctgggtggggggatgcaggtacaaatgacgctggtactgaaaatgggggttccagt
tggggaactgcgcctaagagaagttcttctcagtctcaagctgggaatggatggtcggga
ggaagtgggggtgggggcgggggtggtggttggtga
DBGET
integrated database retrieval system
