Quercus suber (cork oak): 112031657
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Entry
112031657 CDS
T05868
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112031657
03036 Chromosome and associated proteins [BR:
qsu03036
]
112031657
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112031657
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112031657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HHH_3
HTH_44
Reprolysin
Motif
Other DBs
NCBI-GeneID:
112031657
NCBI-ProteinID:
XP_065620948
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MGKNVVSDEEDEFEVKGEYEREHVDGHRGGRDIDDDEEDEEDEEGQDEYEKDGFIVDDVD
EEERADSDEERQRKKKRKKKENYTLDEDDYELLKDNNIAIPHWKQSKKFKRLKKAQEVSE
EPSGLSDKEEMFGSGKGGRTAKEKLKQSLFGDDEGAPLEDIAEEEEQAEDEEDGDIGEED
EMDDFIVDEDNEHGAPPKGGRRPKKEGNRMAPGVSLSVMQEAHEIFGDVDELLQLRKQDL
YSSEWRERKLEDEFEPIVLSEKYMTEEDEQIRELDVPERMQIYEEITGSPPLDDCIVEES
NWIHGQLLSGTVPLFGNRGMGTAKEGGDLSIEKVDIMRFLDLLHVQKLDIPFIAMYRKGE
CLSLLKDPEQPEDDDENQDKNEKTPTLKWHKVLWAIQDLDRKWLLLQKRKSALQSYYNKR
FEEESQLVYDVTRLNLNQQLFESIMKSLKAAGSEREVDDVDSKFNSHFPPGKVGLDEGQY
KRPKRKSLYSTCSKAGLWVVVSKFGYSSEQLGLQLSLDTMRNDELEDPKETPEEMASSFT
CSMFETPQAVLKGARHMAAVEISCEPCVRKHVRSNFMDHAVVSTCPTPGGNVVIDSSHQF
SGVKWLREKPLSAFDDAQWLLIQKAEEEKLLQVTIKMPERDLEKLINEFNEYYLSDSVSK
SAQLWNEQRKLILQDALFGFLTPSMMKEARSLLTSRAKNFLLMEYGKVLWNKVSVGPYQR
MGTDINSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVDDQHRK
KNDQERVLKFMTDHQPHVIVLGAVNISCTRLKEDIYEIIFKMVEENPRDVGHEMDGLSIV
YGDESLPRLYENSRISSDQLPGQSDIVKRAVALGRYLQNPLAMIATLCGPGREILSWKLS
SLENFLNPDEKYGMIEQVLVDVTNQVGVDINLAISHEWLFAPLQFISGLGPRKAASLQRS
LVRAGPIFTRKDFVTVHGLGKKVFVNSVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYG
LAQELAKDVYDEDNADTNDDDDDALEMAIEHVRNRPRILKGLDVDLYASGKNCENKIETF
YDIKRELMQGFQDWRKQYKEPSQHDEFYMISGETEETLAEGRIVQATVRSVQGQKAICVL
ESGLTGILMKEDYSDDWREAELSDRLHEGDILTCKIKSIQKNKYQVFLVCRESEMRSNQH
QYVRHLDPYYHEEQSRLSTQDKARKEKELAKKHFKPRMIVHPHFQNITLDEAKDFLSDKD
PGQSIISPSSHGPSHLILTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKSLKIGEDTFE
DLDEVMDRYVDPLVSHLKGMLSYRKFRKGTKAEVDELLRIEKSENPMRIVYCLSISHEHP
GTFILTYIKSTNAHHQCIGLYPKGFKFRNRMFEDIDQLVAYFKRHIDDPQSTQFLRSIPA
RVPM
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacgtagtctctgatgaagaagatgagttcgaggtcaaaggcgagtacgag
agggaacacgtcgatggtcaccgaggtggtcgtgatatcgatgacgatgaagaggacgaa
gaagacgaagaagggcaggatgaatatgagaaggatggatttatagtggatgatgttgat
gaagaagagagggcagacagtgatgaagagaggcagaggaagaagaaaaggaagaaaaaa
gagaattatacacttgatgaagatgactatgaactcttgaaggacaacaatattgccatt
ccccattggaagcagagcaaaaagtttaagcggctgaaaaaagctcaggaggtttccgag
gagccctctggattatctgacaaggaggagatgtttggaagtggaaaaggtgggcgaact
gccaaggagaagcttaagcaaagtttatttggtgatgatgaaggtgctccacttgaggac
attgctgaagaggaggaacaagcagaagatgaagaggatggagacattggtgaggaggat
gaaatggatgactttattgtggatgaagacaatgagcatggagctcctcccaaaggaggg
aggcggccaaagaaagaagggaataggatggcaccaggagtttccttatctgttatgcag
gaagctcatgaaatatttggtgatgttgatgaactcttgcagctccgtaagcaagattta
tattctagtgaatggagggaaaggaaactggaagatgaatttgaaccaattgttttatct
gagaagtatatgacagaggaggatgagcagattcgggagcttgacgtccctgaaagaatg
cagatatatgaggagataactggttctcctccattggatgattgtatagttgaagagagt
aactggatacatggtcaactcctaagtggcacggtacctttgtttggcaatagaggcatg
ggaactgctaaggaagggggggatctttctattgagaaagttgatatcatgagatttttg
gacctacttcacgtgcaaaaattagatataccgtttattgctatgtatcgaaagggggag
tgcctaagtctgctgaaagatcctgaacaacctgaagatgatgatgaaaatcaggataag
aatgagaagacacctactctaaagtggcacaaggtactttgggcgattcaagacttggac
agaaagtggctgctgcttcagaagcgaaagagtgctcttcagtcatactacaataagcga
ttcgaggaagaatctcaacttgtatatgatgtaacaagactcaatttaaatcagcaactc
tttgaatcaattatgaagtccctcaaggcagcaggatcagaaagggaagttgatgatgtt
gactccaagtttaactcgcatttccctccgggtaaagtgggattggatgaaggacaatac
aagaggcccaagaggaaatcactatatagtacttgcagtaaagctggtctatgggtagtt
gtgagcaagtttggttacagctctgagcaacttggattgcagctatcattagatacgatg
agaaatgatgagttggaggatcctaaggaaacaccagaggagatggcttctagctttaca
tgttcaatgtttgagacacctcaagctgtgcttaaaggagctaggcacatggcagctgtg
gagattagttgtgagccatgtgttaggaaacatgtccgtagcaactttatggatcatgca
gtggtatcaacatgtccaacacctggtgggaacgtggtcatagattcttcccatcagttt
tcaggggtgaagtggttgcgtgagaagccactaagtgcatttgatgatgctcaatggctc
ctcattcagaaggctgaagaggagaagcttcttcaagttactattaagatgccagaaaga
gatttggagaagttgataaatgaattcaacgagtattatcttagtgacagtgtcagtaaa
tctgctcaactatggaatgagcagaggaaattgatattgcaggatgcactttttggtttt
cttacaccctccatgatgaaagaagcaagatctttgttgactagtagagcaaaaaacttc
ttacttatggagtatgggaaggttttgtggaataaagtttcagtgggcccatatcaaagg
atgggcactgatattaactcagatgaagaagctgcaccaagggtcatggcttgctgttgg
gggcctggaaagccagcaaccacttttgtgatgttagattcatcaggggaggtgctggat
gtgctttacactgggtccctcacattgcggtcccaaaatgtggatgaccagcatcgtaag
aaaaatgatcaggaacgtgtattgaagttcatgacagatcaccaaccacatgttattgtt
ttaggagctgtgaatatatcttgtacccgactgaaggaggatatatatgagattattttc
aagatggtggaggaaaatcccagagatgtcgggcatgagatggatgggttaagcattgtt
tatggggatgagtctctacctcgcctttatgagaactctcggatttcatctgaccagcta
cctgggcaatcagacattgttaaacgggctgtcgctctcgggcgatatttgcaaaatcct
ttggcaatgattgcgacgctatgtggaccgggaagggaaatcttatcatggaaacttagt
tcgctagagaactttttaaacccagatgagaaatatggaatgattgaacaggttttggta
gacgtaacaaaccaagtgggtgttgacattaatttggctatcagtcatgaatggttgttt
gctcctctacaattcatttctgggcttggacctaggaaggcagcatctctgcagaggtcc
ttggtaagagctgggccaatatttactcgaaaggactttgtcacggtgcatggacttggt
aaaaaggtgtttgtcaattcggttggtttcttgcgtgtccggcggagtggattggctgct
agcagcagccagttcattgatttgctagatgatacaagaatacatccagaatcttatggt
cttgcacaagagttggccaaagacgtttatgatgaggacaatgctgacacaaatgatgat
gatgatgatgcactggagatggcaatagagcatgttagaaatcgacctaggattttgaaa
ggccttgatgttgatttatatgctagtggcaagaactgtgagaataagatagaaactttt
tatgacataaaaagggaactgatgcagggttttcaggattggcgtaaacagtataaagag
cctagtcaacatgatgaattctatatgatttcaggtgaaactgaggagacccttgctgag
ggaagaattgtgcaagccactgtccgtagcgtgcaaggtcagaaagcaatttgtgtgctt
gaatctggtttgactgggatactcatgaaggaagactattcagatgactggagggaggct
gagttgtcagacaggctacatgaaggtgacattctcacttgcaagattaaatcaattcaa
aagaacaagtatcaggtcttcctagtttgtagagagagtgagatgcgaagtaaccaacat
cagtatgttagacaccttgatccatactaccatgaagaacaaagcaggctgagtacgcaa
gacaaagctcgcaaagaaaaggagctcgcaaagaagcattttaagccaaggatgattgtt
cacccccacttccagaatattaccttagatgaagcgaaggatttcttgtctgacaaggat
cctggccagagtatcatcagccccagttctcatggaccttcccatctaattctaactctc
aaagtttatgatggagtttatgctcataaggacatagttgaaggtggaaaggagcacaaa
gacatcacaagcttacttcgtattgggaagtcattgaaaattggggaggacacttttgag
gatttggatgaggtgatggatcgatatgttgatcccttggtgtctcacttaaaagggatg
ctaagttatcggaagttcaggaagggcacaaaagcagaagttgatgaactcctaaggatt
gagaaatcagagaatcctatgaggatagtttactgtttgagtatctcacatgagcatcca
ggcacatttatcctaacttatataaagagtacaaatgcacaccatcaatgtattggtcta
tatcctaagggatttaagttccggaataggatgtttgaggacattgatcagcttgtagca
tactttaaaagacatattgatgatcctcagtcaacacaatttctcagatcaatccctgct
agggtgccaatgtga
DBGET
integrated database retrieval system
