Quercus suber (cork oak): 112032205
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Entry
112032205 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112032205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112032205
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112032205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
112032205
NCBI-ProteinID:
XP_023920734
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MEPAIDILPSNHATPIVQPVSRTGFYTIEYKRRKLSTNGKDYGRTVFSTSKHSDSEQKKP
KVPPQVIDYSDPFAIPDLLESIDCGKYGSVTKDIKALIARKMQTLNPYFAKYPALSDTFL
EAEKNQSKEASKEATRLPDNHIIDLEEDCTVNDAKAISLQHVNDAKALSHPVVVIDSDEE
DNGCQNHFVPFQEVVLPKPAGQFLMKDFLDFRAPPSHSARGGGQSHSYSAKGGAQSRSYT
AKGGAQQEEPRGELEIKKEKGEYVGIEDEDNHPDAEDDGLEDIWKEMSMALECSKDVAPD
PSSDEEVSESEEDCEHSFVXKDDLGYVCRICGVIERGIETIFEFQYNKVKRSTRTYGSDS
RNGKDRDSTEVVGVKFSEDDLILAEISAHPRHTKQMKPHQVEGFNFLVSNLVGDNPGGCI
LAHAPGSGKTFMIISFMQSFLGKYPHARPLVVLPKGILATWKKEFQTWQVEDIPLYDFYT
VKADNRSQQLEVLNKWVENKSILFLGYKQFSTIVCDNGTSNISALCQEILLKAPSILVLD
EGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFLRLETSRSVV
KRIMSRVDIPGARKQFKAGADAAFYDSVEHTLQKDKDFRRKVAVIQDLREMTSKILHYYK
GDFLDELPGLVDFTVVLNLSSRQKHEVQKLKKLVRKFKISSVGSAVYLHPKLNSLSENHA
TADHVVDEMIGKLDVRDGVKAKFFLNILRLCESAGEKLLVFSQYLLPLKFLERLTVQMKG
WILGKEIFVISGESSSDHREWSMERFNNSPDAKVFFGSIKACGEGISLVGASRIIVLDVH
LNPSVTRQAIGRAFRPGQKKKVFAYRLVAADSPEEEDHSTCFKKELISKMWFEWNEYCGY
RDFEVETVGVNECGDDFLESPQLGEDVRVLYKR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcaattgatatcttgccgagcaatcacgctactccgattgttcaacctgta
tcaagaactgggttttacacaattgaatataaaagacggaagttgtccactaatggaaag
gattatggtagaacagtcttctctacaagcaagcatagtgatagtgaacagaagaaacca
aaggtccctccacaagttattgattacagcgatccatttgctatccctgacttgctggaa
agtatagactgtggtaaatatggaagtgttacgaaagatataaaagccctcattgctaga
aagatgcagacgctgaacccgtattttgcgaagtatcctgcactttcagatacattcttg
gaagcagaaaagaaccagagtaaagaggcttcgaaagaagcaactcgtttgcctgataat
catatcattgatttggaggaggactgtactgtaaatgatgctaaagcaatatcactacaa
catgtaaatgatgctaaagcattatcacatcctgttgtggtcattgactcagatgaggaa
gacaatggatgtcagaatcattttgttcctttccaggaggttgtcttgccaaaaccagct
ggtcaatttctcatgaaggactttttggacttccgtgctccacctagtcattctgcaaga
ggtggaggtcaatcacatagttactctgcaaaaggtggagctcaatcacgtagttacacc
gcaaaaggtggagctcaacaagaagaaccaagaggcgaacttgaaattaagaaagaaaaa
ggtgagtatgttggcatagaagatgaagacaatcatcctgacgctgaagatgatgggcta
gaagatatttggaaggagatgtcaatggcattagaatgttcaaaggatgttgctccagat
ccttcatctgatgaagaagtgagcgaaagtgaggaggactgtgaacattcttttgttntt
aaggatgatcttggttatgtttgtcgcatttgcggggttattgaaagaggtattgagacg
atatttgagttccagtacaataaggtcaaaagaagtactcgaacatacggttctgattct
cggaatggtaaagacagagactcaaccgaggtagttggagttaaattttcagaagatgat
ctgattttagctgaaatctctgcccatccaaggcatacaaagcaaatgaaacctcatcag
gtggagggtttcaattttcttgttagcaatttggtgggtgataatcctgggggctgtatc
ttggcccatgctcctggatctggaaagacatttatgataatcagttttatgcaaagtttc
ctgggaaagtatccacatgctagaccactggtcgtgcttccaaaaggaatcttggcaaca
tggaaaaaggagttccagacatggcaagtagaggatattccactgtatgacttttacact
gtcaaagcagataatcgatctcagcaactggaggtgttgaataagtgggtagagaataag
agtatcctatttctagggtacaaacaattctcaactattgtttgtgacaatggaaccagc
aatatctccgctttgtgtcaagaaatacttcttaaggctccttctattcttgttctggac
gaaggacacactccaagaaatgagaacactgatgttttgcagtcccttgcaaaagttcag
acacctagaaaggttgtactttcaggaaccctttatcaaaatcatgtcaaagaggtgttc
aacatagtcaatcttgttcgaccaaagtttttgcgattggaaacctctcgttctgttgtc
aagcgcatcatgagtagagttgatataccaggtgcaagaaagcagttcaaagcaggtgct
gatgcagcattttatgactcggttgaacacactttacagaaggacaaagattttagaagg
aaagtggctgtcatacaagatctgcgcgagatgaccagcaagatccttcactactataaa
ggggacttcctagatgagcttcctggtcttgttgacttcactgtagtactgaatctaagt
tcaagacagaagcatgaagttcagaaattaaagaagttggtgaggaagttcaagataagc
tctgttggaagtgctgtctatcttcacccaaaattgaattctctctcagagaatcatgcc
acagctgatcatgtagtggatgagatgatagggaaattagatgtcagagatggagtgaaa
gctaaattctttcttaatatacttagattatgtgagtcagctggagagaagcttctagtt
ttcagtcagtacctcctacccttaaaatttctggagagattaacagtgcaaatgaagggt
tggattctcggaaaagaaatttttgtgatttcaggtgaatcaagttctgatcatcgtgaa
tggtccatggagcgctttaacaattcccctgatgccaaagtattctttggctcgatcaag
gcatgtggggagggtatatctttggttggggcatcccgcataatagtactggatgttcat
cttaatccgtctgtgacccgccaagcaataggtcgtgcatttcgcccgggtcaaaagaag
aaagtgtttgcatatagattggtagctgctgactcacctgaggaggaagatcacagcact
tgcttcaagaaggaattaatttcaaagatgtggttcgaatggaatgagtattgtggttat
cgggattttgaagtggagactgttggtgtgaatgagtgcggtgatgacttcttggaaagt
ccacagttaggggaagatgtaagggttctgtacaaaaggtag
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