Quercus suber (cork oak): 112032212
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Entry
112032212 CDS
T05868
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112032212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112032212
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112032212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
112032212
NCBI-ProteinID:
XP_023920744
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MKVSSEVENYVSRSYPVTKRDKFKQKKQKSTLRIVDDSEPFASPNLAQMLKTSMFGSVTK
EIEALCARRSRLLNHDVAKNPMLPFTCSDVPKNECKEPKNLVIQKATHLAFENIIDLEDD
CMLIDALSVVPPVIDLSSDDEDDEHGRHSNICPKVVLEPSVKDSIDILKSKDVKGQVESM
IGKADIRRDKGCNFVVEDDVEVEEDSHWSFQEKESNYEPNTVDRSLEDIESKDVQNAADE
VDIRIDKDKYDGSGDDMEIEEDSHQIYQKEEHNLQTYAEDNGLTNICKKMMVALECSEDI
LKSKAVREKVDSIIGKVDMRIIKDGNFGAEDVLVEEESHQLFQEKENNYEINTVDDRLDD
KQIKAPSERDILKSKAVREKVDGIIGKIDMRIIKDGNFGAEDVLVEEESHQLFQEKQSNY
EINTVDDRLDNKQIKAPSERVRNVADEINIRTDKDKYYGSGEDMVIEEDNYHSHQEEEYN
LQSNAKDDGLANIWNEMAVALECSKDIGVDPSTDEHTREGGEECDHSFFLKDDLGYVCRI
CGVVDKAIESIFEFQYSKGKRTTRTYMRDSQSNNSIGSDKSLPLGVKSSDDDLMANEMFA
HPRHSKQMKPHQVEGFNFLCSNLLSNNPGGCILAHAPGSGKTFLVISFIQSFLARYPHAR
PLVILPKGILATWKKEFQIWQVEDILLLDFYGSKAESRSQQLDVLRQWVAQKSILLLGYK
QFSAIVCDRGTSKVATDCQDILLKVPSILILDEGHTPRNENTDMVQSLSRIQTPLKVILS
GTLYQNHVKEVFNILNLVRPKFLRLQASQDIVRRIMSRVQVSSVRKNLKPGMDLAFFDLV
EHTLQQKDENSKRKATVIQDLREMTRRVLHYYKGDFLDELPGLVDFNVMLNLSAIQKIEV
EKLRRLDYFRRNSLGSLVYMHPQLKYFSEKYPSTGDKSLVDDEKIDEMLENMNVREGVKV
KFFLNMLGLCESAGEKLLVFSQYILPLKLLERLSMKVKGWRPQKEIFMITGDSNSEYRER
SMEHFNSSGDAKVFFGSIRACGEGISLVGASRILILDVHLNPSVSRQAIGRAFRPGQKRK
VYTYRLIAADSPEEEDHNTCFRKESISKMWFEWNENCGHSEFEMKTRDVKDCGDLFLESL
SLQEDIKLLSQRLELSC
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttagttctgaagtagaaaattatgttagcagatcttatcctgtgactaagcgt
gataagttcaaacagaagaaacaaaagtccacattgagaattgttgatgattcagaacca
tttgccagtcccaatttggcgcaaatgttgaaaacaagtatgtttggaagtgtgacaaaa
gaaatagaggccctttgtgcacgaaggtcacgattgctgaaccatgatgttgcaaaaaat
cctatgcttccttttacatgttcagatgtgccaaagaacgagtgtaaagagcctaagaac
ctggtgattcagaaggccactcatcttgcatttgaaaatatcattgatttagaggatgac
tgtatgttaattgatgccctttcagtagttccacctgtaatagatcttagttcagatgat
gaagatgatgaacatgggaggcattctaatatatgtccgaaggttgtgttggagccttcc
gtgaaggattccattgatattctaaagagcaaagatgtaaaggggcaagtagaaagcatg
attggcaaagctgatattaggagggataaaggttgtaattttgttgtggaagatgatgta
gaggttgaggaagacagtcactggtcatttcaggaaaaagaaagtaattatgaacctaat
actgtagatcgtagcctggaagatatagaaagcaaagatgtacaaaatgcagctgatgaa
gttgatatcaggatagataaagataaatatgatggctcaggagatgatatggagattgag
gaagacagtcaccaaatttatcagaaagaggaacataatcttcaaacatatgctgaagac
aatggtctgacaaatatatgcaagaagatgatggtcgcattagaatgttctgaggatatt
ctaaagagcaaggctgtaagggaaaaagtagatagtataattggtaaagttgatatgagg
ataattaaagatgggaactttggtgcagaagatgtactagttgaggaagagagtcaccag
ttatttcaggagaaagaaaataattatgaaattaatactgtagatgataggctggatgat
aagcaaatcaaagctccaagcgaaagggatattctaaagagcaaggctgtaagggaaaaa
gtggatggtataattggtaaaattgatatgaggataattaaagatgggaactttggtgca
gaagatgtactagttgaagaagagagtcaccagttatttcaggagaaacaaagtaattat
gaaattaatactgtagatgataggctggataataagcaaatcaaagctccaagcgaaagg
gtaaggaatgtggctgatgaaatcaatatcaggacagataaagataaatattatggttca
ggagaggatatggtgattgaggaagacaattaccactctcatcaggaagaggaatataat
cttcaatcaaatgctaaagacgatggtctggctaatatatggaatgagatggcagtcgca
ttagaatgttccaaggatattggtgttgatccttcaactgatgaacacacaagagaaggt
ggggaagaatgtgatcattcttttttcttgaaggacgatctcggttatgtttgtcgcatt
tgtggagttgttgacaaagcaatagaatccatatttgaattccaatatagtaagggcaaa
aggactacacgaacttacatgcgtgattctcagagtaacaacagcatagggtcagataag
agtttaccacttggagttaaatcgtctgatgatgatctgatggcaaatgagatgtttgct
catcctaggcatagcaagcaaatgaaaccccatcaagtggagggcttcaattttctttgt
agcaacctgctatctaataatccaggaggctgcattttggcccatgctccaggttctgga
aagacatttttggttataagtttcattcagagtttcctagccaggtacccccatgctagg
ccactggttattctacctaaaggcatcctggctacctggaagaaagagttccaaatatgg
caagttgaggacattctgttgcttgatttttacggttcaaaagcagagagtcgatctcag
cagctggatgtattgagacaatgggtagctcagaagagcatcctattacttggatataag
cagttctctgccattgtttgtgaccgtggaactagcaaggtggcaactgattgtcaggat
attcttctgaaggtcccatccattcttatcttagatgaaggtcatactccaaggaatgag
aacactgatatggttcagtccctttcaagaatccaaacacctctcaaagtcattctttcg
ggtactctttatcaaaatcatgtgaaagaggtattcaacattttgaatcttgttcgtcct
aagtttcttagattgcaagcttcccaagatattgttaggcgcattatgagcagagtacag
gtatcaagcgtgaggaagaatttaaaacctggcatggacttagctttctttgacttagtg
gagcacacgctgcaacagaaggatgaaaactccaagaggaaagcgactgtcatacaagac
ctccgtgagatgactcgccgagtcctccattactacaaaggagatttcctggatgagctt
cctggacttgttgatttcaatgtaatgctcaacctcagtgcaatacagaaaattgaagtt
gaaaagttgaggaggttggattacttcagaagaaattctttgggtagtcttgtctatatg
catccgcagttgaaatatttttcagagaaatatccatcaactggagacaaaagtttagtt
gatgatgagaagatagatgaaatgttggaaaatatgaatgtgagagagggagtaaaagtg
aagttctttcttaatatgttgggcctatgtgaatcagctggtgagaagctgctggttttt
agccaatacatattgcccctgaaactcttggagagattatcaatgaaggtaaaaggttgg
agacctcaaaaagaaatttttatgataactggtgattcaaattccgagtatagggagcgg
tccatggaacactttaatagctctggtgatgcaaaagtcttctttggttcaatcagagct
tgtggggaaggtatatctctagtgggggcttctcgcatcctaattttggatgttcatctt
aatccatcagtaagccgccaagcaataggccgtgcattccgaccaggtcaaaagagaaaa
gtatacacttatagattgattgctgctgattcacctgaagaggaagatcacaacacatgc
ttcagaaaggagtcgatttcaaagatgtggtttgagtggaatgagaactgtggacatagc
gaatttgaaatgaagactcgtgatgtgaaggattgtggtgatctattcttggaaagtctg
tcattgcaggaagatataaagcttttgtctcaaaggttagagctttcatgctga
DBGET
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