Quercus suber (cork oak): 112032477
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Entry
112032477 CDS
T05868
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112032477
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
90S particles
Other 90S particles
112032477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
112032477
NCBI-ProteinID:
XP_065635324
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MKKKVSAAPRGGGGGRGRGGRGRGGARKDEKFSEDSFFMAESKKRRKIADDADVIDSGES
DDERGYGFRGGSDGEDDDDGDAETADEVRQRVAMAQLDKYRRIAKEEEDEDDEDDSDEGI
DRVGEKEGLRDSLVAKILQQEQLEESGRVRRAMASRVQKPKATGGFKVLLKHRQSVTAVA
LSEDDSRGFSASKDGNIMHWDVESGKREKYQWPSDDVIRSHGAKDPQGSAKKHSRNVLAL
AVSSDGRYLATGGLDRHVHLWDTRTRGHIQAFPGHRGSVSCLTFRQGTSELFSGSFDRTV
KIWNAEDRAYMNTLFGHQSEVLSIDCLRKERVLTVGRDRSMQLFKVPEESRLVFRAPASS
LECCCFISNDEFLSGSDDGSIELWTMLRKKPAHIVKNAHPLLAANKNLDQKNSEIIPNGH
IENGNHNESYHCQSAYSWVSSVTVCRNSDLAASGAGNGSVRLWDIESETKDVRPLFDLPL
VGFVNSLAFAKSGQFLVAGVGQEPRLGRWGCIKSAQNGIAVHSLKLS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaagtgtcggcggctccaagaggaggaggaggaggaagaggaagaggaggt
agaggaagaggaggggcaagaaaggacgagaaattttcggaggattcgtttttcatggcg
gaatcgaagaagcggcggaagattgcggacgacgccgacgtgatagacagcggcgagtcg
gacgatgagaggggctatggattccgcggcggttccgatggggaagatgatgacgacggc
gatgctgagaccgccgacgaggtgaggcagcgcgtggctatggcacagttggataagtat
cgtagaattgctaaggaagaagaggacgaagacgacgaggacgacagcgatgaagggatc
gatagggtaggcgagaaggaaggcctcagggactcgcttgtcgcgaaaattttgcagcag
gagcagctggaagagagtggccgagttcgccgagctatggcctctagggtacaaaagccg
aaagctactggtgggttcaaagtgttattgaagcacagacaatctgtgactgctgtggct
ttatcagaggatgactcgaggggcttttcagcttccaaggatggcaacattatgcattgg
gatgtagaaagtgggaaacgcgaaaaataccaatggccaagtgacgatgtaataaggtcc
catggagccaaggatccgcaaggttcggctaagaagcatagtagaaatgttttagcacta
gctgttagctctgacggtcggtatttggctactggaggattagatcgccatgttcatttg
tgggatacccgtacacgaggccatattcaggcctttccaggtcacagaggatctgtatca
tgtttaacctttaggcaagggacttcagaacttttctctggttcatttgatcgaacagtc
aagatatggaatgcagaagacagagcctacatgaatacattatttggccaccaaagtgaa
gtattatctatcgattgtttacggaaagaacgggtgttgactgttggacgagatcgaagc
atgcagttgtttaaggtccctgaggagtcacgtttagtatttcgtgcccctgcatcttct
ctggagtgttgttgttttattagtaatgatgaattcttatctggctccgatgatggaagt
attgagctttggaccatgttgcgaaagaagcctgcacacattgtaaagaatgctcatcct
ttattggctgcaaacaagaatctcgatcaaaagaatagtgaaataatccctaatggacat
atagaaaatggtaaccataatgaaagctatcattgtcaatcagcatattcctgggttagt
tccgtcactgtatgtagaaacagtgatcttgctgcatcaggagccggtaatggttctgtt
cgattatgggatattgaaagtgagaccaaggacgttcgacccttgtttgaccttccattg
gttggatttgtgaattccttagcttttgcaaaatctggacagtttctggttgctggagtt
gggcaggaacctcgtttgggaaggtggggatgtatcaaatctgctcagaatggaattgca
gttcattcccttaagctctcataa
DBGET
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