Quercus suber (cork oak): 112033047
Help
Entry
112033047 CDS
T05868
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112033047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qsu04040
]
112033047
Ion channels [BR:
qsu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112033047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
IQ
TehB
Motif
Other DBs
NCBI-GeneID:
112033047
NCBI-ProteinID:
XP_065616773
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSHLSRRRGNGARNKDIERQPLKEGEGDSSAKIMMTKTIFDPQGKFLRRWNIIFVLSCAI
AVSVDPLFCYLPMINIPEICIDLDKKLLITTIVLRSINDIIYLMHIMLQFRTGFVDENLR
KVGKNVLNTNAVAIARRYLKSYFVFDILVILPIPQVAISSIISEMRRMTSSYKIVMLNCA
VIFQYVPRILQIFLSWKELIRSDEKFEQNIWFKAALNFFLYLLAGHVLGAFWYFFSFQRM
MDCWHSSCAIQSGCVQTYFNCDNSRGNFSFSNDFCTSDTQFNFGIYLEALQSGVMESRQI
LGKIFYSFWWGMQNLSLLGQNLKTSIYVWDNFFSVYISVTRLFLFLYFLGNLQLVISRSE
ELRMKMKSEKRKKQKEKIELWSSKHDLPSDLRGPIMDNVIQKFREDEDVYLENLLPNLPG
ELQNNVKQHICLKLLENVEVLRGMDEQTLLKMCHTLTPVYYQQHSYVIREGDPIDAIFFI
TNGIAWTYTIGYNGGGTLPTHAERLVEGQFFGGELLEWLRKSTSTSKNNLSKLPISSKTL
KTHTKVEAFALMADDLTKIWSYMLSRDSEPLQFEAASIIQRAWRAHGSKMGDTIGASGQL
QSSSA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatctttcacgtcggcgagggaatggtgcaaggaataaggatattgagaggcaa
cctctcaaggaaggtgaaggtgattcatcggcaaaaataatgatgacaaagacaattttt
gacccacaagggaagttccttcgaaggtggaatataatatttgtgttgtcgtgcgcaatt
gcagtatcagtggatcccttgttctgttaccttcccatgatcaacatcccagagatctgc
attgacttggacaagaagttgttgatcacaactattgttttgcgatcgatcaatgatatc
atttaccttatgcatattatgttgcaatttcgtactggttttgtagatgagaaccttcgc
aaagttggaaaaaatgtgttgaatacaaatgctgtggcaatagctagaaggtacttgaag
tcatacttcgtattcgacattctagttattcttccaataccacaggtggcaatttcaagt
attatttcagaaatgagacggatgacctcttcatataaaatagtaatgttgaactgcgct
gttatcttccaatatgtgccaagaattctccaaatattcctatcctggaaggaacttata
agaagcgacgagaaatttgaacaaaacatatggtttaaagctgcgttaaatttctttctg
tatctccttgctggtcacgtattgggagccttttggtattttttctcttttcaacgaatg
atggattgctggcattcatcatgtgcaattcagagtggatgtgttcaaacatattttaac
tgtgataacagtagaggaaatttctcattttctaatgatttctgtacatcagatacacaa
tttaattttggaatatatttagaagcccttcaatctggtgtgatggagtccagacagatt
ctaggaaaaatattttacagtttctggtggggcatgcaaaatctgagtttgcttggtcaa
aacctcaagacaagtatatatgtatgggataacttcttttcggtttatatttctgtcacg
cgcttgttcctgtttttatattttttgggaaatttgcagttggtaatttcaagatcagaa
gagttacgcatgaagatgaaatcagaaaaacgaaaaaaacagaaagaaaaaatagaattg
tggagttccaaacacgatcttcctagtgatttgagaggcccgattatggacaacgtgatt
cagaaattcagagaagacgaagatgtctacttggagaaccttcttcctaatcttcctggg
gaacttcaaaataatgtaaagcagcatatctgcttaaagctactagaaaatgtagaagtg
cttcggggtatggatgaacaaactttgcttaagatgtgccacactctcacaccagtctac
taccagcagcacagctatgtcattcgggagggagacccaattgatgcaatattcttcatt
acaaacggcattgcatggacctatacaatcggttataatggtggaggaactttacccaca
catgctgagcgtcttgtagaaggtcagttctttggaggagaacttctagaatggcttcgg
aaatctacctccacctccaagaataacctatccaaactccccatttcatcaaaaacgctg
aaaacccacacaaaagtggaagcctttgctctaatggccgacgacttgacaaagatatgg
tcttacatgttgtcgcgagactcagagccattgcaattcgaggcagcttctattatacaa
cgagcctggcgtgcgcatggatccaagatgggtgataccattggtgcttcaggacaactt
cagtcaagcagtgcatga
DBGET
integrated database retrieval system
