KEGG   Quercus suber (cork oak): 112033301
Entry
112033301         CDS       T05868                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qsu03036]
    112033301
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112033301
Chromosome and associated proteins [BR:qsu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    112033301
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112033301
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 112033301
NCBI-ProteinID: XP_023921851
LinkDB
Position
Unknown
AA seq 1161 aa
MAERSQLSHLIESFVDSSRSPTQQVEFTQYVRALQAASLDKIASLVKNDVLTMEGLVREM
QMYLTTTDNIVRARGILLLAEVLTCLATKPLDNATLHSLIGFFTDRLADWKALRGALVGC
LALMRRKSSAGVITSTDAKAVAESFLQNLQVQSLGQHDRKLCFELLECLLERYPNTVTPM
GDELIYGICEAVDSEKDPQCLMLTFHIVEVLVQLFPDTSGPFASFAGDLFEILSCYFPIH
FTHPRGEDLGIKRDDLSQALMLAFSSTPLFEPFAIPLLLEKLSSSLPSAKLDSLKYLSSC
TSNYGPERMAKHARAIWLSIKDALYTSLQEPTLSFTSESLDGLVFQENEIAKEALTLLQQ
VIMQNNGLFLSLIVEDEDINIILNTVPTYESYNDIPLQGKLKLFAAGCILSISTKTSVAC
CNMIFESFFPRLMEILGLSEKNLSGDHSPKDNYLISKRLNFGALYLSVELLAACRDLIAG
STQIACKSVSTYETSYCMLHSFSNLVTKAFCSTLVTSTHDADIYFGVKGLQILATFPGDV
SPVPISEFENILITFMSIITVNFKKTLLWRLALKALMNIGSFIDRNNESEKILSYMPIVV
EKIVSLVSLDDVTMPFPLKLEAISGIGTSGLNYMLHIIQGFEEALFANLSEIYVHGNLKS
AKITIWLLECYSNKLLPWIHDNGVFEEVLLRFPINIWKQIESCVDFSVPEKELLDAMMTA
MKHAVAFCSEESQNEIIQKAYNVLSSSTSFPLKESMALTIPFQLEGLQLTQKMDNLLCRN
EWILSLFASVVIAVRPQTHIPNVKVILNLFITTLLKGHVPAAQALGSIVNKFGKSSTGSE
ISSDCTLEEALDIIFQLKLWTHQDNGALLRCSVNGSEMGHTDLCQAVVNNKLPQKLAITG
LSWIGKGLLLRGHDKVKDVTMIFLECLLSNGNALPLSQHSLENSCEQDLRASVMKSAADA
FRILMSDSEVCLNRKFHAIIRPLYKQRFFSTMMPILQPLIMKSDSLLSRSMLYRAFAHII
SETPLVAVLGEAKKLIPILLDCLSTLNKDAQDKDTLYSLLLVLSGILTDKDGQEAVVDNA
HLVINCLTGLIAYPHMMLVRETAIQCLVAMSELPHARIYPMRIQVLQAISKALDDSRRAV
RQEAVRCRQAWASIASRSLHF
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggcagaacggagtcaattgagtcatctcattgagtccttcgtcgactcgtctcgttcc
ccgactcagcaggttgaattcactcaatatgtgcgtgcactacaggctgcaagcttggac
aaaattgcttctcttgtgaagaatgatgtattaactatggaaggactggtcagggagatg
cagatgtatttgaccactacagataacatcgttcgtgcgagaggtatccttcttcttgca
gaagtgcttacatgtcttgcaacaaagccactagacaatgctacattacatagcttgata
gggttcttcactgacagattggcagattggaaagctttacgtggtgcacttgttggttgc
ttggcactgatgaggaggaaaagtagtgctggtgtgattactagcactgatgccaaagca
gttgcagagtcttttttacagaacttacaggtgcagtctttaggacagcatgataggaag
ctttgctttgaacttctggagtgcctgttagaacgctaccccaatacagttactccaatg
ggtgatgagcttatctatggaatttgtgaagctgttgattcagaaaaggatcctcaatgc
ttgatgcttacgtttcatattgttgaagttctggtgcaactgtttccagatacatctggt
ccatttgcaagttttgctggggatctttttgaaattttgagctgttactttcctattcat
tttacacatccaaggggtgaggatcttggtatcaaaagggatgacctctctcaggcacta
atgttggcattttcctccacacctctgtttgagccatttgccattccattgcttcttgag
aagctttcttcttctctaccatcagcaaagctcgattcactgaagtatctcagcagttgc
acatcgaattatggaccagagagaatggcaaaacatgccagagctatttggttgtcaatt
aaagatgcattatatacttcactgcaagagcctactttatcctttacttcagaatctcta
gatggacttgtttttcaggagaatgaaattgcaaaagaagctttaacgcttctgcagcag
gttattatgcaaaacaatggtctttttttaagtttgattgttgaagatgaggacataaat
ataattttgaacactgtccctacttatgagagttataatgatattcccttgcaaggcaag
cttaaattatttgcagctggttgtatcctgtctatttctaccaagacctccgttgcttgc
tgtaatatgattttcgaaagcttcttcccccgcttgatggaaattctggggctttctgaa
aaaaatttatctggagatcactcaccgaaggacaattatttaatctccaaaagactaaat
tttggagctctttatctctctgtcgaacttcttgcagcatgcagagatttgattgctggc
tccacacaaattgcttgtaaatcagtttctacatatgagacaagctactgcatgcttcat
agcttttcaaatttagtaactaaggccttttgttctaccttggtgacaagtactcatgat
gcagatatttattttggagtgaagggtttacagattctagctactttccctggagatgtt
tctccagtaccaatatctgaattcgagaatattttaatcacattcatgtcaattatcaca
gtgaatttcaagaagacattattatggagattggcattaaaggcattgatgaatattggc
tcatttattgatagaaataatgagtctgagaaaattttaagctatatgccaattgtggtt
gaaaagattgtttcactggtgtctcttgatgatgtcaccatgcctttccccctcaaactg
gaagcaatatcaggcattggcacaagtggactgaattatatgctgcacattatccaaggg
tttgaagaggctttatttgccaatttatctgagatttatgtccatggaaatttaaagtca
gccaaaatcacaatttggcttttggaatgctactctaataaattgcttccatggatccat
gacaatggagtttttgaggaagttttgttgcgatttcctattaatatttggaagcaaatt
gaaagttgtgttgattttagtgtcccagaaaaggagcttcttgatgcaatgatgactgca
atgaagcatgctgttgcattttgttctgaggaaagccagaacgaaataatccaaaaagct
tacaatgtactttcatcaagcacttcttttccactaaaggaatccatggccctcaccatt
ccattccaactggaaggtctacagctcactcagaagatggacaatctgttgtgtagaaat
gaatggattctttcactatttgcatctgtagtcatagcagttcgtccgcaaacacacatt
ccaaatgtaaaagtaatattgaatttattcataacaactcttcttaagggtcatgttcca
gcagctcaggcattgggttctatcgttaacaaatttggtaaaagttccactggatctgag
atttcaagtgactgtaccttggaagaagcactggatatcatttttcaattaaaattatgg
acccatcaagataatggtgctttgctgagatgtagtgttaatggaagtgagatgggtcac
actgatttatgccaagctgttgtgaacaataaattgccccagaaacttgccattactgga
ctatcatggattggaaaaggtttgcttttgcggggtcacgataaagttaaagatgtaact
atgatttttctggagtgtttattgtcaaatggcaatgccttaccattaagtcagcattca
ctagagaacagttgtgagcaggatttgcgtgcttctgtgatgaaaagtgcggcagatgca
tttcgtattcttatgagtgattctgaagtttgtttgaatcggaagttccatgcaataata
cgaccactctataagcaacgttttttctccaccatgatgcctattttgcaacctttgata
atgaaaagtgattcattactttctagatctatgctgtaccgggcatttgcacatataata
tctgaaactccattagttgctgttctgggcgaagccaagaagctcatacctattcttctg
gattgcttatccacgttgaacaaggatgctcaggataaagatacattgtacagtctcctg
ctagtcttatctgggatattgacagataaagatgggcaagaagctgtagttgataatgct
catcttgtcattaattgcctcactggactcattgcctaccctcatatgatgcttgttcga
gagacagccattcaatgtctagttgccatgtccgagctgccacatgcaaggatctatccc
atgagaatacaggtactacaagctatatcaaaggctcttgatgattccaggagggctgtt
cggcaggaagctgtcagatgccgacaggcatgggcatcaattgcatcaagaagtcttcat
ttctga

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