Quercus suber (cork oak): 112033322
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Entry
112033322 CDS
T05868
Name
(RefSeq) polygalacturonase isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Module
qsu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112033322
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112033322
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
112033322
NCBI-ProteinID:
XP_065620769
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All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MAFPGIICIVLAHLSMFISLVLADPTIYNVVSYGAKPDGKTDSAEAFLSAWTKACASMQP
ATIYVPAGKFALGQVTFIGPCYDKVNVMLIGTLVAPSDYTVLGNKAYWIVFEHIDGLAVS
GNGILDGQGTSLWACKASGKSCPLGATTLEFTNSNNIVVSGLTSINSQMFHIVVNACNNV
NMQGVRVIAAGNSINTNGIHVQLSSNVTILNSNMQTGDDCISVGPGTINMWIENVACGPG
HGISIGSLGKNQQETGVQNVTITTTNFTGTQNGVRIKSWPRPSNEFARNIIFEHVNMVNV
QNPIIIDQNYCPSKDCPYQASGVKISNVTYQDIHGSSATEVAVNFNCSPRNPCSAITVKN
IMLTYKNQVAKASCNYASITSFGIVQPAINCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcattccctggcataatttgtattgtccttgcacatctctctatgttcatttcctta
gtgctagctgatcctacgatatacaatgtagtgagttatggagccaaaccagatgggaaa
acagactcagctgaggcttttcttagtgcatggacaaaagcttgtgcctccatgcagcct
gccactatttatgtaccagcagggaagttcgctctagggcaagtgacttttattggacca
tgctacgacaaagttaacgttatgcttattgggaccctggtggccccatcggactatact
gtccttggaaataaagcatactggattgtgtttgagcatattgatgggcttgcagtatct
ggtaatgggattcttgatgggcaaggtactagcttgtgggcttgcaaggcctctggcaaa
agttgtcctttaggagccacgacattagaatttaccaactcgaacaacatcgtggttagt
ggattaacctccataaacagtcaaatgtttcatattgtcgtcaatgcctgcaacaacgtg
aatatgcaaggtgtcagggtcatcgccgccggaaatagcataaacaccaatggcattcat
gttcaattatcttccaatgtcacaattctcaactctaatatgcaaacgggtgatgattgc
atctcagttggacctggtaccattaatatgtggattgagaatgtagcatgtggaccaggg
catggaatcagcattgggagtttaggcaaaaaccagcaagagactggtgtccaaaacgtg
acaattacaacaacaaattttaccggtactcagaatggggtgaggattaaatcttggcca
aggcctagcaatgagtttgctaggaacattattttcgaacatgtcaatatggtgaatgtc
cagaatcctattataattgatcaaaattactgcccctctaaagattgcccttatcaggct
tctggtgtaaaaattagtaatgtgacataccaagacattcatggaagttcagcgacagag
gtggctgtgaattttaattgtagtccaagaaatccatgctccgcaataacagtgaaaaac
ataatgctcacttacaagaatcaagtagccaaagcttcatgtaattatgcatctatcaca
tcttttggtattgtccagcccgcaatcaattgcttatag
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