Quercus suber (cork oak): 112033889
Help
Entry
112033889 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112033889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112033889
03036 Chromosome and associated proteins [BR:
qsu03036
]
112033889
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112033889
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112033889
PBAF complex
112033889
GBAF(ncBAF) complex
112033889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
CLP1_P
SANT_DAMP1_like
DUF7685
Motif
Other DBs
NCBI-GeneID:
112033889
NCBI-ProteinID:
XP_065616500
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MPASPSFPSETRTKWKKRKREPQINRRQKHDEEDEDEEDNHDDDEDEEDNHDDDLDPQND
SEDPQSDAVPLDPNGLNESEVLSDAGARISDFPPVVRHAVNRPHPSVLAIAALERANESG
ESKGQNSMVLENVSYGQLQALSAVPADCPVFDQDRMDGAAAAYVITPPQIMEGRGVVKRY
GSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNYIVAKYMENPEK
RLVVSDCQGLVVGVDNEDLNRIVRFLDHWGIINYCAVAPSREPWNGGSYLREDPNGEIHV
PSAALKSIDSLIKFDKPKCRLKAADVYSSLSSHDADASNLDNRIRERLSENHCNYCSRSL
PTVYYQSQKEIDTLLCSDCFHEGXFVTGHSSIDFIRMDSTNDYGDPDGESWTDQETXLLL
EAMEIYNENWNEIADHVGTKSKAQCILHFLRLPMENGLLENIEVPGISSNSLNGDDHGRS
NSNYNGDSAGSCHQDADPESRLPFANSGNPVMALVAFLASAVGPRIAAACAHASLAALSD
ENGLSASGSIIQIEGSGHGNRMNSESVHGREGVRHGEIVNSIHQKEENSGVHGSWGQNEA
KIPLSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEV
ETFLMKECEQVERTRQRIAAERARMISARFGSAGATSPMILPGVGPSMVNNNTSNNRQQI
ISASPSQPSIPGYNNNQPVHPHMPFMPRQQMFGMGPRLPMSAIQQSPTSNVMFNSSGNVQ
PTLNQPMLRPVSGTSSSLG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccccttccttcccttcagagacccgcaccaaatggaagaagcgaaagaga
gagccccaaatcaaccggaggcagaagcacgacgaagaagacgaagacgaagaagacaac
cacgacgacgacgaagacgaagaagacaaccacgacgacgacctagacccccaaaacgac
tccgaggaccctcaatccgacgccgttccgctcgatcccaacggccttaacgagagcgag
gttttgtccgacgccggcgcccgaatctccgacttccctccggtcgtcaggcacgccgtc
aatcgccctcacccctccgtgctggctattgcggccttagagcgtgccaatgagagtgga
gaaagcaagggccagaattcgatggttttggagaatgtttcgtatggtcagcttcaggcg
ctttccgccgtgcctgccgattgtcccgtgttcgatcaggaccggatggatggcgctgcc
gctgcctatgtgatcacgccgccgcagattatggaaggccgcggcgttgtcaagcggtat
gggagtagggttcatgtggtgccaatgcattcagattggttttcaccagctacagtgcat
cgactggagaggcaagtggtgccacatttcttctctgggaaatcaccagaccacacacca
gagaaatacatggaatgcaggaattacattgtcgccaaatacatggaaaatccggagaag
aggctcgtggtctctgattgccaaggattggtagttggtgttgataacgaagatttaaat
cgaattgttcggtttcttgatcattggggaattatcaattattgtgctgtggcaccaagt
cgtgagccttggaatggtgggtcctacttaagggaggatccgaatggtgagatccatgtg
ccgtcagctgctttaaagtccattgatagtttaatcaaatttgacaagcccaaatgtcgg
ctcaaagcagctgatgtttattcgtcattgtcatctcatgatgctgatgcctctaatctg
gacaacagaatccgtgagcgtctgtctgaaaatcattgcaattattgttctcggtctctt
cccactgtgtactatcagtcacaaaaagagattgatacactattatgctctgattgcttc
catgaggganngtttgttactggccattctagcatagattttataaggatggattctaca
aatgattatggtgatccagatggggaaagttggactgatcaggaaactntactactactt
gaggcaatggaaatctacaatgagaattggaatgaaattgccgaccatgttggtaccaag
tctaaagcacaatgcattcttcactttctccgtctacccatggagaatggcctactggaa
aatattgaagttccaggcatatcatccaactcgttaaatggagatgaccatggaagatca
aattcaaattataatggggattcagcaggatcctgccatcaagatgctgatcctgaaagc
agactcccttttgcaaattctgggaatccagttatggccctggttgcctttttggcctct
gctgttggaccaagaattgctgcagcctgtgcccatgcttctttggcagcattgtctgat
gagaatggcttatctgcttctggaagcattatacagatagaaggatctggacatggtaat
aggatgaactcagagagtgtacatggcagagaaggtgttcgtcatggagaaattgtaaat
tcaatccatcaaaaagaagagaattcaggagtacatggttcatggggtcaaaatgaggca
aagattccattatctgcagaaaaagttaaagctgctgctaaagctggcctcgctgctgca
gcaacaaaggcaaagctgtttgcagatcatgaagaacgggaaattcagcggctatctgct
aatatcataaatcatcagttgaaaagattggagctgaagctgaagcaatttgctgaagtg
gaaacgtttttgatgaaagaatgtgaacaagttgagaggacaagacagaggattgctgct
gagagggcccgaatgatatcagctcgatttggatctgctggggccacttcaccaatgatt
ctaccaggtgttggtccttccatggttaacaataataccagcaacaataggcaacaaatt
atatcagcttcaccttcacagccgagcattccgggatataataacaatcaaccagtccat
ccccacatgccatttatgccgcggcagcaaatgtttggaatggggccaaggttgcccatg
tcagcaatacagcagtcacctacttcaaatgtcatgttcaactcttcagggaatgtacag
cctactctcaatcaaccaatgcttcgacctgtatctggtactagctctagtttaggttag
DBGET
integrated database retrieval system
