Quercus suber (cork oak): 112034611
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Entry
112034611 CDS
T05868
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112034611
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
112034611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
Fer4_6
AAA_22
AAA
AAA_29
RsgA_GTPase
AAA_23
NACHT
Rad17
Fer4_9
Fer4_21
Fer4_2
AAA_16
nSTAND3
TsaE
Fer4_10
SRP54
AAA_5
Fer4_4
ORC-CDC6-like
AAA_24
Fer4_16
AAA_19
Fer4_17
Fer4_7
Motif
Other DBs
NCBI-GeneID:
112034611
NCBI-ProteinID:
XP_023923200
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSERLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPASKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLAKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDERDMKSELCADLQLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMTKTQG
NFRLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGSDVEIPEFNVSYKPQ
KISPKFPSTVRHLLHSKIRDSYMHAQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGRPSLDCIANSPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLESTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacgattgacgcgtatagcgattgtgagctccgataggtgcaagcccaagaag
tgccgacaggaatgcaaaaaaagctgccctgttgtcaaaaccggaaaactctgtattgag
gttactcctgcatcaaagattgctttcatctctgaggaattgtgtattggatgtggtatc
tgtgtcaagaaatgcccgtttgaagctattcagatcatcaacttgccaaaagatctggcc
aaagatacaacccatcgctatggccctaacacttttaaattgcacaggttaccagtcccg
agacctgggcaagttcttggcctggttggaactaatggcattgggaagtccactgccctc
aaagttttggctggaaaactgaaaccaaacctcggtcgcttcaataatcctccagattgg
caggaaatcttgacatacttccgaggatctgagctgcagaattattttacacgtattctt
gaagataatttgaaggccattataaagccccagtatgttgatcacattccaaaagctgtt
caaggtaatgtagggcaggtgctggaccaaaaggatgagagagacatgaagtcagaactc
tgtgctgatcttcagctgaaccaggttatagaccgtaatgtaggggatttgtctggagga
gagcttcagagatttgctattgctgttgttgctgtacagaatgcagaaatatatatgttt
gatgaaccttcaagttaccttgatgtaaaacagaggcttaaagctgctcaagttgtccgt
tctttgctcaggcctaatagctatgtaattgttgtggagcatgatcttagcgtcctggat
tacttgtcggacttcatttgctgtttatatgggaaaccgggagcatatggagttgtaacc
cttcccttctcagtcagagaaggaatcaatatcttcttggctggatttgttccaacagaa
aatttacgttttcgggatgaatcccttacctttaaggttgctgagactccacaagaaagc
gcggaggaaattgagacatatgcacgttacaaatacccaaccatgaccaaaactcaagga
aatttcaggcttcgtgttgttgagggtgaatttactgattctcagattattgtgatgctg
ggtgagaatgggactggcaaaacaacatttatccgtatgctggctggtttactgaaacct
gattctgtagaaggttctgatgtggagattcctgagtttaatgtttcttacaagccccag
aagatcagtccaaaatttccatccactgtgcggcacttgctacattcaaaaatacgggat
tcatacatgcatgctcagtttgtgtcggatgttatgaagcctcttcttattgaacaatta
atggatcaagaagttgtgaatctttctggtggagagttgcaaagagttgcattatgccta
tgccttgggaagcctgcagacatttatctgatagatgaaccaagtgcatatcttgattct
gagcagcgtatagttgcttcaaaagtcattaagaggtttatccttcatgcaaagaaaact
gctttcgtggttgaacatgattttataatggcaacttatctggcagatagagttatcgtg
tatgaggggaggccatcgcttgattgtattgcaaattctccacagtcattgttgactggg
atgaatctcttcttatctcatttggatatcacatttagaagggacccaactaatttccgc
cctagaatcaacaaactggaatcaacgaaggacagggagcagaaatctgctgggtcctat
tattatctggatgactga
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