Quercus suber (cork oak): 112034678
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Entry
112034678 CDS
T05868
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112034678
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112034678
Surveillance factors
Other surveillance factors
112034678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
112034678
NCBI-ProteinID:
XP_023923266
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MADDGKANLPNDLSSSKTTDEAIGGNGEDKTLLGLLDESKDQVASESNIPLSPQWLYAKP
ADAKALTAGTLGEVGAPGSLPHGNSTDPSPKDGWRLDGSQEKKDRRRAAPDVEFNRRWRE
EERDTGILGRRDNRKEDRYADVISTSENRAFSSADRWQDSRSSGHESRRDNKWSSRWGPD
DKEKNSRTERRTDIEKEGNDTDKQSFVSSNRAASERDTDSQDKWRPRHRMEAHAGGLAAH
RTAPGFGLERGRVEGANVGFAQGRGRSNSASSTGSVLVNKNNSILGKSGPHEDIYIYPRG
KLLDIYRKKKTDPTFNAMPDGMEHVSPITQVGSIEPLAFVAPDAEEEVVLGDIWKGKINS
SGVSRNSFRGKNGGSNDNITGICDVTLGGLRQSSTSNTEENVESFGVANLNDSCQFPVAV
GLDTCGSQFDRIEVSKGYDCRSVNEISSPSSTAAELKSSENNQAEEVAILKHFKLKGIES
ATSFELGGQLPDDSSSLFDFLSLQKTSSSNQQPLNNYEEGHPPGSDIPPEEWSLYYLDPQ
GDTQGPFLGVDIIKWFEQGYYGPDLPVRLSDAPDGSPFQELGSVMPHLRFRSGCASGNDL
VTNLEPSDAVGGILEENMAASSSALDYKDCAVISSQKSAPSVHEATSGVSVQSRMPNQGY
HSELQYRDDDSFQNFVRKDDEVIFPGRPGSSNGNPLRRPSTDIHSSFSGSMRHPSLANKY
SETAMRNHQDDNMHPFGLSLSELKDSCAQSSNMSPSMGDQGHFVDPLVKRDAAFVSQSSF
GAMPDQPFGETWTGDYRRNKHSNPNFHLGSLDIPHISHMEQECSSFDMTEHLMPQKLQME
QLQQQNFLSHPFRHVIGLGVENSSGLVLSQSKNPNFQQAVHHPEPDLEHLLALQRHELQQ
QHLLQQQQVHLHEMKLRQQQQQQSQIQQFLHHQISQPGYGQSKVDPLRDNPFDQIQMRKH
LLHELQLNSHSSRHLDPMLEQIIQAKVGQNAVQGRQADILDLMLQPKHGNTIALEQQLRL
QQEQAQVQQLSMTLRQQLGLEGERHNGGPWSVDEAGQFFKNPASHQQAVSARFNAPDFCL
QQNRLSSHEEQLRNLSWNHALPEQIQQGVYDPSSMSFGRSMPLPASAPGMNLDSVNTSSH
GLDLQERRLYRHSDDQLGSFSSGFPSHPQKASNEYYASHLDAIQSCSSGNNGRVENSWIE
AQKQQLHLEALRQRMEVEVNVSSVDSNVWTSAGGEENSRRGLMELHQKMVLQSAQSSEID
YRHSVLPSRSPETFLLNSESNYSNFPFNLPPDQQLFLNDSFTKRPRDSNSSAFLQDHFVG
VAVNEQKFNNLGKSERSPFGSNSGDQSFLLGTKDTSHVGYVNNSLIVKSATDKDLLELEG
NMGKRHGSKGMISTSSSVSEITENLSEKTETAFGRELPFNAHSRHSSLSSAGGDGGGLFS
YEMGLDKSLRGEDIGNDRLPSSLTKGFDSVFHTSHDVLLEPASASLVKPKNAMGMEASDE
FGPLSEGGCELVGDHQASRKKDVHFQRTSSSSDASVSETLFIDMLKKPVLPETDVASGAP
SESSDGGIQAGRSGKKKGKKGRQIDPALLGFKVSSNRIMMGEIQRFED
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacggcaaggccaatctgccaaacgatctctcctcctccaaaacgacagat
gaagccattggaggaaatggtgaggacaagacacttttggggttactcgatgagtcaaaa
gaccaagtagcatctgaaagcaatattcctctttcaccacagtggctctatgctaaacca
gctgatgctaaggcattaactgctggcactttgggggaagtgggtgcacctggttctttg
ccccatggaaactccacagatcccagcccaaaagacggttggcgtttagatgggtctcag
gaaaagaaagaccggagaagggctgctcctgatgttgaattcaatcgccgctggcgtgaa
gaggagagagacactggcatacttggtagaagagataacagaaaagaagatcgttatgca
gatgtcatttcaacttctgagaatagagccttttcctcggctgatcgctggcaagatagc
cgtagttctgggcatgaatcccggagagacaacaaatggtcatcaaggtggggtcctgat
gacaaagaaaagaattctagaactgaaaggaggacagatatagagaaagagggtaatgac
actgacaaacaatcttttgtcagtagtaatcgtgcagcttctgaacgtgacactgattct
caagataaatggaggccacgccatcgtatggaagctcatgcaggtggcttggcagcacac
cgcactgcaccagggtttgggttggagagaggacgggtggagggtgcaaatgtgggattt
gctcagggacgaggaaggtcaaactctgcatcttctactgggtctgttcttgttaataag
aataacagcatactaggaaaatctggcccccatgaagatatatatatctaccctcgggga
aaacttctagatatttatcgtaagaaaaagactgatccaacattcaatgccatgcctgat
gggatggagcatgtatcaccaataacacaagtaggttctattgagccattggcttttgtt
gcacctgatgcggaggaagaggttgtacttggagatatatggaagggaaaaatcaatagc
agtggagtgtcacgcaactcatttagaggcaagaatggaggatcaaatgataatatcact
ggcatctgtgatgtgactctaggtgggctgagacagagttcgactagtaatactgaagaa
aatgtcgaatcttttggagtggctaatttaaatgattcttgccaatttcctgttgccgtg
gggttggatacttgtggttcacagtttgatagaattgaggtttcaaagggctatgattgc
cgcagtgtcaatgagattagcagccccagcagtactgctgctgaactcaaatctagtgaa
aataaccaggcagaggaagttgcaattttgaaacactttaagttgaaaggcattgagtca
gctacttcctttgaacttggcggccagcttcctgatgattcaagttctctatttgatttt
ctatctttacagaaaacttcaagcagtaatcagcaacctttaaataactatgaggagggg
catccaccgggaagtgatatcccacctgaggaatggagtttgtattatcttgatcctcaa
ggggatacacagggaccttttctgggagttgatatcattaagtggtttgaacaaggctat
tatggacctgatttaccagttcgcttgtcagatgcccctgacggatcaccatttcaagaa
cttggtagtgtcatgccacatcttagatttagatctggttgtgcctccggcaatgatctg
gttacaaatttagaaccatccgatgctgttggaggcatcttagaagagaatatggctgct
tcttcttctgcacttgactataaagattgtgctgttataagtagtcaaaagtctgctcca
tctgtacatgaggctacctcaggtgttagtgttcagtcaagaatgcctaatcagggttat
cattctgagctccagtatcgcgatgatgatagtttccaaaattttgttagaaaagatgat
gaagttatctttcctggaaggcctggaagtagcaatggtaaccctttgcggagaccctct
actgacattcacagttcattttccggttctatgcgacatccttcccttgcaaataaatat
tcagaaactgccatgcgtaatcatcaggatgataatatgcatccttttggcctctcactg
tctgagctcaaagacagttgtgctcaatcatccaatatgtcaccaagcatgggtgatcag
ggtcactttgttgatcctttggtcaagagagatgccgcttttgtgagtcagagctccttt
ggtgctatgcctgaccaaccttttggtgagacatggaccggtgattatagaagaaataaa
cattctaaccctaattttcatctgggttctctagatattcctcacatatctcacatggaa
caagaatgcagttcttttgacatgacagagcatctgatgccacaaaaactgcaaatggag
caacttcaacagcagaatttcctttctcatcccttcagacatgttatagggttgggtgtt
gagaattcttctggtttagttttgtctcagagcaagaaccctaatttccagcaggcagtc
catcatccagagccagatctggaacatcttttggcacttcagcggcatgagcttcaacaa
cagcatctgttgcagcaacagcaggttcatctccatgaaatgaaactgcggcaacaacag
cagcagcagtctcaaattcagcagtttctgcatcaccagatatctcagcctggttatggg
cagtcaaaggtagatcctctaagagacaacccttttgatcagattcaaatgaggaagcac
cttctgcatgagttgcagctgaattctcactcttcaaggcaccttgatccaatgcttgag
cagatcatccaagcgaaagttggccagaatgctgtccaaggcaggcaggctgatattttg
gaccttatgttgcagccaaagcatggaaatacaatcgctttagaacagcagcttcgtcta
cagcaagaacaggcgcaggtacagcaattatctatgacattgaggcagcagttagggttg
gagggggaaaggcataatggtgggccttggtcagttgatgaagctggtcagtttttcaaa
aatcctgctagtcatcaacaggctgtgtcagctagatttaacgcgccagatttttgcctg
caacagaataggctttcctcccatgaggagcaactgagaaatctcagctggaatcatgct
ttaccggagcaaattcagcaaggtgtttatgatcctagctcaatgtccttcgggaggtca
atgcctcttcctgctagtgctcctgggatgaacttggacagtgtaaacactagttctcat
ggtctagatctacaagagcgacgactctataggcattctgatgatcaactcggttctttt
tcttctggtttcccatctcatccccaaaaagcgtccaatgagtattatgcttctcatcta
gatgcaattcagagctgctcctctgggaacaatggtcgggttgaaaatagctggattgaa
gcacaaaagcaacaattgcatcttgaagctttgcgacaaagaatggaggtggaagttaat
gtatcttctgtagattcaaatgtttggacatctgcaggaggtgaagagaactcaagacga
ggtttgatggaacttcatcaaaaaatggttcttcaatctgcacagtcatctgaaattgat
tatcgacattctgtattaccttcccgaagtccggaaacctttctgctgaattcagagtca
aattattcaaattttccttttaatcttcctccagatcaacaattatttctgaatgactct
ttcacaaaaaggcctcgagattccaattcaagtgccttcttgcaggatcactttgttggt
gtggctgtgaatgaacagaagttcaacaatttgggaaagagtgaaaggtctccctttgga
tctaattctggagaccagtcgttcttattgggcactaaagatacttctcatgttggttat
gtaaataatagcctaatagtgaaatcagctacagataaagacttattagagttagaagga
aacatggggaagagacatggatcgaagggtatgatttcaacgagcagttcagtttcggag
atcacagaaaacttgtcagagaaaacagagacagcatttggcagggaactaccttttaat
gctcatagtaggcacagctcactgagtagtgctggtggtgatggtggaggcttattcagt
tatgagatgggattagataaatcactccgaggagaggacattggtaatgacaggctgccc
tctagtttaactaaagggtttgacagcgtttttcatacatcccatgatgttttgttggag
ccagcatcagcttctcttgtcaagccaaaaaatgcaatgggcatggaagcttctgatgaa
tttggcccactttcagaaggtgggtgtgagttagtcggtgaccatcaggcatctaggaag
aaggatgtgcattttcagaggacctcgtcttccagtgatgcttctgtttccgagacatta
ttcatagacatgctcaaaaaaccagttctcccagagactgatgtagctagtggggctcct
tcagagtcatctgacggtggcatacaagcagggcgaagtggcaaaaagaaagggaagaaa
ggaagacagattgatcctgcccttcttggattcaaagtctccagcaaccggataatgatg
ggtgagattcagcgctttgaagattga
DBGET
integrated database retrieval system
