Quercus suber (cork oak): 112035669
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Entry
112035669 CDS
T05868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112035669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112035669
03009 Ribosome biogenesis [BR:
qsu03009
]
112035669
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112035669
Spliceosome [BR:
qsu03041
]
Complex A
U1 snRNP components
U1 related factors
112035669
Complex B
112035669
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
112035669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
112035669
NCBI-ProteinID:
XP_023924265
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MNLYDHRYADPNSYRERRSDLIGPPAPVAPPVIGAAASSYGRGGPLPYGGAPPPQVYGRG
GGSSGGSGSFNGYPPFQPPAGRFDVGRSGDGGRIGNGNVGDRRIGNVGRGGGGGGRGFDS
GSGGGGRGGISRSGGDRGGRIGGRGYGGGRGGSSSFGGGGRGFDGRGGGRGGRHGGGSRG
DLDNIALPKQDFGSLVPFEKNFYVETPSVRAMSEHEAVVYRVRREITVEGHDVPKPIRMF
HEANFPDYCLDAIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV
KAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRANIRITCIYGGAPKGPQIRDLKR
GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL
YWSATWPREVETLARQFLRNPYKVIVGSSDLKANQSIIQIVEILTDMEKYNRLIKLLKEM
MDGSRILIFMETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTAT
DVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHANAKYARDLIK
ILQEAGQVVSPALSSMARSAGSGLGGSGGNFRSRGRGGFGNRSQISGSNTIPLGGRRPW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaacctatacgaccaccgctacgccgatccgaattcctatcgcgagcgtcgaagtgat
ttaattggtcctccagcaccggtggctccgccagttattggtgctgccgcttcgagctat
ggccgtggtggacctttgccatacggaggcgctcctcctcctcaggtttatggtagagga
ggaggaagcagtggtgggtcgggtagttttaatgggtacccgccttttcagccgcctgct
ggccgatttgatgttggccgaagtggtgacggtggtagaattgggaatgggaatgtgggg
gatagaagaattggtaatgtagggcgtggtggtggtggtggtgggagagggtttgattcg
gggagtggtggtggtggtagaggtggtataagtcgcagtggaggagataggggtggccga
attgggggtaggggttatggtggtggtcgtggtgggagtagtagttttggtggtggcggg
aggggattcgatgggcgtggtggtggaagaggaggtaggcatggtggggggtcaagaggg
gacttggacaacattgctttgcctaagcaggactttgggagtttggtcccttttgagaag
aatttttatgttgagactccttctgtgcgggcaatgagtgagcatgaagctgtggtttat
agggtgaggcgggagatcacggtggaagggcatgatgttccgaagccaattaggatgttt
cacgaagctaatttccccgattactgccttgatgcgattgcaaaactgggttttgttgag
ccaacaccaattcaggctcaaggatggccgatggctcttaagggtagggatttaattgga
attgctgagactggttctggtaagactttggcatatctgcttccggctttggtccatgtc
aaagcgcagcctcgattggtacaaggtgaaggtcccattgtattggtattagcacctact
agagaattagctgtccaaattcaagaagaagctctaaaatttgggtcacgtgctaatatt
agaattacttgcatatatggtggtgctcctaaagggcctcaaattcgcgaccttaaaaga
ggtgtggagattgttattgctacacctggccgactgatagatatgttggaagctcaacac
acaaacttgcgaagagtgacctatcttgtgttagatgaggctgatcgaatgttggacatg
ggatttgagcctcagataaggaaaattgtatcccagatccgaccagatagacagacattg
tattggagtgccacatggccaagggaggttgaaactctagcaaggcagtttttacgcaat
ccatataaggttattgttggatcatcagatctgaaagcaaaccagtctataattcaaatt
gttgaaattttgacagatatggagaaatataataggctgattaaactccttaaagaaatg
atggatgggagccgaattctgatatttatggagacaaaaaaaggatgtgaccaagttaca
aggcaattgagaatggatggatggccagctttatccatccatggtgataaaaaccaggcc
gaaagggactgggtccttgctgagtttaaaagtggcagaagtcctataatgactgccact
gatgttgctgcacggggtcttgatgtgaaggacatcaaatgtgtggtcaattatgatttt
ccatcaagccttgaagattatgtccacaggattggccgaactggtcgggcaggagcaaag
gggactgcgttcacctttttcacccatgcaaatgcaaagtatgctagggatcttatcaag
atcttgcaagaagctgggcaggttgtgagtcctgcactctctagcatggctcgttcagct
ggttctggtctaggaggatctgggggaaactttcgctccagaggacgaggagggtttggc
aatcggtctcagatttcaggctctaatactattccccttggtggaaggagaccttggtag
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integrated database retrieval system
