Quercus suber (cork oak): 112036022
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Entry
112036022 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112036022
Spliceosome [BR:
qsu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112036022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
112036022
NCBI-ProteinID:
XP_065623009
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FGDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AXDVSIDVIHLHMLRWYFEKPKGVSRSDCTKVGLVSSGNELQKLPFVMFDYAVSASENWI
NAYKMPKSKNDIARQMKCQKDPLAVDITPGNLQPSQKDYTNPYLPVNPTAIEGIVQPAVG
ADGKRKELESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDV
NTAAVAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDISLLAAQQASA
LPAAQPVWQNPQAGPMYPGNDFTAPGAGPAQYPGGQVAPWDPSMQAGRPPFVSAPSTYPG
QSYAASSVSSYASAPMPSSSSPHTPTSQIPSPGASMGLSPGVQANLRPGGVSSPSHLQQG
VSPNVRPGGASPPGQPAYYGQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctccgggcagccccagttccggtacacccagaccccatcaaaggtcctccat
ctccgcaatctcccctgggagtgcactgaggaggagctcatcgagctctgtaaacccttc
ggcaagatcgtcaacaccaagtgcaacgtcggcgctaatcgcaaccaggccttcgtcgaa
ttcggtgatttaaatcaagcaatttcaatggtttcatattatgcatcatcttcagagcct
gcacaagttcgtggtaaaactgtgtatattcaatattcaaatagacatgaaattgtcaac
aacaaaagtcccggagatgttcccggaaatgtcttattggtaaccatcgagggtgtagag
gctngggacgttagcattgacgttattcacttgcacatgcttcgttggtattttgaaaag
cctaaaggggtttctaggtcagattgcacgaaggtgggactggtgagctctggaaatgaa
ttgcagaagttgccctttgtaatgtttgattatgcagtctcagcatcagagaactggatt
aatgcctacaaaatgccaaaaagtaagaatgatatagcaagacaaatgaaatgtcaaaaa
gatccactggctgttgacatcacacctggaaacctgcagccttctcaaaaggactataca
aatccataccttcctgtgaatcctactgcaattgagggaattgtgcagcctgcggtaggg
gctgatggaaaaaggaaagaactcgagagcaatgtgcttcttgcttcaattgagaacatg
cagtatgctgtcactgtggatgtgcttcacacggtattctctgcatttggtaccgttcag
aaaattgctatatttgagaagaatggtcaaactcaggcactcgtccaatatcccgatgtt
aatactgcagcagttgccagagaagctttagaaggacattgcatatatgatggtggctat
tgtaagcttcatctatcatactctcgtcatactgatctcaatgtaaaggcttacagtgat
aaaagtagagattatacaatcccagatataagtttgcttgcagcacaacaagcgtcagct
ctccctgctgctcaaccggtttggcaaaatcctcaggctggtccaatgtatcctgggaat
gattttacagctccaggtgctggtcctgctcagtatcctggtggacaggtagcaccatgg
gatcctagcatgcaagcgggcagacctccatttgtctcggctcctagcacttatcctggt
caaagttatgcagcatcctcagtttcttcatatgcctctgcaccaatgccatctagttct
tcccctcatacaccaaccagccaaattccttctcctggggcatccatgggattatctcct
ggggttcaagccaatttgcgacctggtggcgtttcatctcccagtcatcttcaacaaggg
gtttctccaaatgtgcgacctggtggcgcttcacctcctggtcagcctgcatattatggc
cagtag
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