Quercus suber (cork oak): 112037104
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Entry
112037104 CDS
T05868
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112037104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112037104
03036 Chromosome and associated proteins [BR:
qsu03036
]
112037104
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112037104
Coactivators
SAGA/TFTC/STAGA complex
112037104
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112037104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
112037104
NCBI-ProteinID:
XP_065619675
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MCALQNVTVLSQGNNHAPSQSLPLWQTASQDQGTECQNQQDQRNAQKQEQTISGMELKQH
GSVIENQQQQSDASKELNCLQMSQKRTQDDCQQGPAQQISIQNPQQIHIQNPQKIPVQNP
QTTGMQISEKTPILVHEPDRSSSIEGESQYSKLQKISNQQATITERASNPINHNNRAGQV
PFGLLLPVLQAQLDKDRAMQLQTIFAKLKKNEIPKEGFVRLMRGIVGDQMLKMAIQKIQS
QPSANQLQLQSQVSARQHPQRMPSVNASSTQFSDPHSFAQLHQKGTISSADSSHIPSSVV
DSSYPAIENNAQKSREVNRPSDSHGVPVSQVTSSNVNTVNQERERSSIPAQGHNKQQQHL
HFPPIYGGSGGNYHPYSGSNVNTSTSSVKPQPHDAQMRQISQHQNISSTQLGGTTQAMSM
PKFERPNSVNDPKRVQGGSLSHLANNSTSQQNPVPWQSATNKEQISTPSSLVVGVKQEVI
DQPTQQQHKLNFPHPHGLSSGSAAQVEQGNTTPGTIKEESSEKQSTRMGLSTSTSMMPSN
SVSRSITAQLESTVPQLGNQIPSTTSSAGINARTPPKKPSIGQKKPLEAHGSSPPLPSKK
QKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRASEASRRVVQEEEERLIL
QKAPLQKKLAEIMAKSGLKCISTDVERCLSLCVEERMRGLISNLIRLSKQRVDIEKPRHR
TVVTSDVQQQIMTMNRKAREEWEKKQAEAEKLRRLNDPEGNNGVDGDKEKDDGRGKSLKA
NKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGVDTSGSQPSKDVSRKP
LSTSGRKDNQETEKRGNAAPVAASAGTVRKPGRNQITLAQTRVARSISIKDVIAVLEREP
QMSRSSLIYRLYERVRSDATAE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcattgcaaaatgtgacagttttatctcaaggaaacaatcatgctcccagtcag
tcattaccactgtggcaaactgctagccaagatcaaggtactgaatgtcaaaatcaacaa
gaccaaagaaatgcacagaagcaagaacagactatatctggaatggagctaaagcaacat
ggatctgttattgaaaatcagcagcaacagagtgatgcctcgaaggaactcaattgcctc
caaatgtcacagaaaagaacccaagatgattgtcaacagggtccggcacaacaaatttcc
atccagaatcctcaacaaattcacatccagaatcctcaaaaaattcccgtccagaatcct
caaacaactggcatgcagatttctgaaaaaactcctatcctagtacatgagccagataga
agctctagcattgaaggtgaatctcaatattcaaaattacagaagataagtaatcaacag
gcaacaatcacagagcgggcaagcaacccaataaatcataataatagagcagggcaagta
ccatttggcttgttgttgcctgtcttgcaagcccagcttgataaagacagagccatgcaa
cttcaaacaatatttgctaaactgaagaaaaatgagatccccaaagaagggtttgttagg
ctcatgagaggtattgtgggagaccaaatgctcaaaatggcaattcagaaaatacaatca
cagccaagtgccaaccaattgcagttacaatctcaagtttcggcacggcaacaccctcag
cgaatgccatctgttaatgccagttccacacaattcagcgatccccattcgtttgcacaa
cttcatcagaagggcacgatctcttctgcagactcttcgcatattccctcttcagttgtt
gattcaagctatccagccatagaaaacaatgctcagaaatctcgagaggtgaatcgcccg
tcagattctcatggagtgcccgtaagccaagtgacttcttccaatgtgaacactgtcaat
caagaaagggagcgatcctcaattcctgcacaaggacataacaagcagcaacaacatttg
cacttcccacccatttatggaggtagtggtggtaattatcacccatattctgggtcaaat
gtcaatacttccacatcttctgtcaaaccacaacctcatgatgcacaaatgaggcaaatt
tcacaacatcagaacatcagctcaactcaattaggtgggacaacacaagccatgagtatg
cctaagtttgagagaccgaattctgtcaatgatccaaagagagttcagggtggatctctt
tctcacttggcaaacaactcaacatcacaacagaatccagttccttggcaatcagcaaca
aataaagaacaaatttctaccccttcatcattagtggttggtgtcaaacaggaagtgatt
gatcagcctactcagcagcagcacaaactcaattttccccatccacatggattgtcttct
ggttctgctgcacaggtagaacagggaaatacaactcctggaactataaaggaagaatct
tcagagaagcagtctactaggatgggtctttcaacttctacgagcatgatgccttcaaat
tcagtttctcgttccataacagcacaattggaatctactgtcccgcagttaggcaatcaa
atcccatctacaacctcttctgctggtattaatgccaggacacctcccaaaaagccttct
attggccagaagaaaccactcgaagcacatggttcatcaccacctctgccaagtaaaaag
caaaaagtatctggggccttttcagatcaaagcattgaacaactaaatgatgtcactgct
gtcagtggagttaatcttagggaagaggaagaacagctattttctgggcccaaggaggac
agtcgagcttcagaagcatctcgaagagttgtgcaagaagaagaagaaaggctgattttg
cagaaagctcctctccaaaaaaagctggctgagatcatggccaaaagtggtttgaagtgt
ataagcaccgatgtggagcgatgcttgtcactgtgcgtggaggaaagaatgcgtggacta
ataagtaatctaatcagactgtcaaaacagcgggttgatattgagaaaccaagacaccga
actgttgtcacctcagatgttcaacaacaaatcatgacaatgaataggaaagctagggag
gaatgggaaaaaaaacaggctgaagcagagaagctgcggagacttaatgatcctgagggt
aataatggagttgatggtgacaaggagaaagatgatggtcgtggtaaatcacttaaggca
aacaaagaggaagatgacaaaatgaggacaacagcggcaaacgttgcagcccgtgctgct
gttggaggagatgacatgctttcaaaatggcaactaatggctgagcaagcccggcagaaa
cgtgaaggaggggtggatacatcaggttctcaaccaagtaaagatgtgagtcgcaagcct
ttatcaacatctggaagaaaggacaaccaagaaacagagaaaaggggcaatgcagctcct
gttgctgcttctgctgggactgttagaaaacctggaaggaatcaaattactctggctcaa
actagggttgctcgtagcatctccattaaagatgtgattgcagtcctggaaagggaaccc
cagatgtctaggtcttctctgatatatcgcttgtatgagagagttcgctctgatgccacc
gctgaataa
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