Quercus suber (cork oak): 112037402
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Entry
112037402 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112037402 isoform X3
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112037402
Membrane trafficking [BR:
qsu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112037402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_VPS8
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
112037402
NCBI-ProteinID:
XP_023926116
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MYMSYGWPQVIPLEQGLYPSSQQIVYLKVINRLLLVVSPSHIELWSSFQHRVRLGKYKRS
SDSLQREGENLQAVWSPDGKLIAVLTSSFFLHIFKVQFTEKRIQIGGKQPSSLFLASISL
LLSEQVPFAEKDLALSNIVCDNKHMLVGLSNGSLYNISWKGEFYGSFELDPFPCDSSEIT
QIPNSFDNGFASGGAPGVIVSDHNISSKSAIIQLELCLPLRLLFVLYSDGQLVSCSVSKK
GVKQAESIKAEKRLGSGDAVCTSVASEQELLAVGTRRGVVELYDLTESASLIRTVSLYDW
GYSMDDTGSVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPMVKP
NQDSKYEPLMGGTSLMQWDEYGYRLYAIEEGSSERILAFSFGKCCLNRGVSGTTHVRQVI
YGEDRLLVVQSEDTDDLKMLHLNLPVSYISQNWPVQHVAASKDGMYLAVSGLHGLIIYDI
RLKKWRVFGDITQEQKIQCKGLLWMGKIVVVCNYIDASNTYELLFYPRYHLDQSSLLGRK
PLLAKPMVMDVYQEYILVTYRPFDVHIFHVKLLGELTPSSTPDLQLSTVRELSIMTAKSH
PAAMRFIPDQLPRDNIPNNHISSSPDLLLSEPARCLILRVNGELSLLDLDEGRERELTDS
VELFWVTCGQSEEKVNLIEEVSWLDYGHRGMQVWYPSPGVDPFKQEDFMQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRDKREEALRL
AQLSAEKPHFSHCLEWLLFTVFDTEITRQNVSKNHVSVSKYAKFSLLEKTCDLIRSFPEY
FDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGRDYEQASTDSDKLSPRFLGYFLFRPNYRRQS
SEKSSFKEQSAHISSVKSILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSAR
LENFASGLELIGQKLQMATLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSFLIFSSMI
CGYGKHIALPCSHIRCLLNTMICLKTWKRNFRQSQIWKISQGSIGFLSLDFGNRLLLIGV
IQWEHFLGRSKYQSNPIQMTKHPSVR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgtcatatggatggcctcaggtgatcccactggaacaaggtctttacccctct
tcccaacagatcgtataccttaaagtcatcaatcgtctcttgttggtcgtgtccccctct
catatagagctatggagctcgttccagcacagagtgagattggggaagtacaagaggagt
tcggattcgctgcaacgggagggagagaatttgcaggctgtgtggagtcctgatggcaaa
ttaatagctgttcttacatcatctttctttcttcacatttttaaggttcagtttacagag
aaaagaatacagattggagggaagcaaccttctagtttatttcttgcttctatatctctt
cttctcagtgagcaggtgccttttgcagagaaggacttggcattgagcaatattgtatgt
gataataaacatatgctagttggactttctaatggatctttatacaacatctcttggaag
ggggagttctatggatcatttgaacttgatccctttccatgtgatagcagtgaaattacg
caaataccaaattcctttgataatggttttgcttctggaggggctccaggagttattgta
tctgaccataatatctccagcaagtctgctattatccagctggagctttgtcttccattg
aggttgctattcgtgttatattctgatgggcaactggtgtcatgttcagtcagtaagaaa
ggtgtaaagcaagccgaatctattaaagctgaaaaaaggttgggttctggtgatgctgta
tgtacttcggttgcttcagaacaagagctccttgctgttggtaccagaagaggagttgtt
gagttatatgacctgacagaatctgcatcacttattcgtactgtgtctttgtatgattgg
ggatattcaatggatgatactggctctgtcagttgtattgcatggacacctgataattca
gcttttgcagttgggtggaagttaagaggacttacagtttggtctgtttctgggtgccgt
ttgatgtcgacgatccgtcagattggtttaagttctgtctcgtctccaatggttaagcca
aaccaggatagtaagtatgaacctttgatgggtggcacctcactgatgcagtgggatgaa
tatggatataggctttatgctattgaggaaggatcttctgagagaattcttgcattttct
tttggcaaatgttgcctaaacagaggagtttcaggaacaacacatgttcgtcaagttatt
tacggggaagatcggttgcttgttgtgcagtctgaagatactgacgatcttaaaatgcta
catcttaaccttccagtttcatacatctcccaaaattggccagttcaacatgtggctgct
agcaaggatggaatgtacttggcagtttctggtctccatgggttaatcatatatgatata
cggttgaaaaaatggagagtctttggagatattactcaggagcaaaagattcagtgcaaa
ggtttgttatggatggggaagatcgttgttgtctgcaactacattgatgcttctaacacg
tatgagttgcttttttatcctagatatcaccttgatcagagctcactgcttggtcggaaa
cctttgcttgccaagccaatggtgatggatgtctatcaagagtacattcttgttacgtat
cggccatttgatgtccacatattccatgtgaaattattaggtgaattgacaccttctagt
acaccagatttacagctttctacagtacgggaactctcaatcatgactgcaaagagccat
cctgcggctatgcgctttatccctgatcagcttcccagagataacatcccaaacaatcat
atttcttcctctccggatctgttacttagtgagcctgcaagatgtttgatattgagggtg
aatggggaactttcacttcttgatttggatgaaggacgtgaaagggagcttacagactct
gttgaattattttgggtcacttgtggtcaatcagaggagaaagtaaatttaattgaggaa
gtttcgtggttagattatggccaccgaggaatgcaggtttggtatccatctcctggtgtt
gacccttttaagcaggaggatttcatgcagttggatccggagctggaatttgatcgtgaa
gtataccctctggggcttcttccaaatgctggtgttgttgttggcgtttcccagagaatg
tcattttcagcatgcactgaatttccatgttttgagcctactcctcaagctcaaactata
ctgcattgcctacttcgtcaccttcttcagagggacaaaagggaggaggctttaaggttg
gcacaattatcagcagaaaagcctcatttttcacattgtctggagtggcttctattcact
gtatttgatacagaaataaccaggcaaaatgtaagcaagaaccatgtctcagtctctaaa
tatgctaaattctctcttctggagaagacctgtgatttgatcagaagtttccccgagtat
tttgatgtggttgtaagtgttgcaagaaaaacggatggtcgacattgggcggatttgttt
tctgctgctggaagatctacagagttgtttgaggagtgcttccagcggagatggtaccgt
actgctgcttgctatatacttgtgattgctaaacttgaaggtcctgctgtgagtcagtac
tgtgctttacgcttattacaggcaacgcttgatgaatcattgtatgaacttgctggggag
ctggtaaggttcttgctgagatcaggaagggattatgaacaagcatctacagattcagac
aaattatctcctagattcttgggctattttcttttccgtcctaattaccggaggcagtcc
tcggagaaaagttcattcaaggagcagagtgctcatatttcttctgttaagagtatctta
gaaaaccatgcgagttatttaatgtcagggaaagaactttctaagcttgttgcatttgta
aaaggcactcagtttgatttagtggagtatcttcaaagagaaagatatggatctgctcgc
ttggaaaactttgcttcagggcttgaactaattgggcaaaagcttcaaatggctactttg
cagagccggttggatgcggaattccttttggctcatatgtgctctgtcaagttcaaagag
tggatagttgtattggctacacttctaagaaggtcctttttgatcttttccagcatgata
tgcggttatggaaagcatatagcattaccctgcagtcacatccggtgtttgctgaatacc
atgatctgcttgaagacttggaagagaaactttcgtcagtcacaaatttggaagattagc
cagggcagtattggatttctaagcctagactttggcaacagattgttgctaattggagta
attcaatgggaacatttccttggccggagcaaatatcagtcaaatcccatacaaatgacc
aagcatccatcggtccgttga
DBGET
integrated database retrieval system
