Quercus suber (cork oak): 112038009
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Entry
112038009 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112038009 isoform X2
KO
K07573
exosome complex component CSL4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112038009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112038009
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112038009
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112038009
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
112038009
NCBI-ProteinID:
XP_023926589
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MEEAAAAAEVVVVTPGEVLGKATQVRAGRGAYVAPHNNLVYASLTGFRRTLSPPPNSLDQ
RPTVEVTGHKAHGAVPEPGSVVIARVTRVTARMASADILCVGPKSVREKFTGSIRQQDVR
ATEIDKVDMHLSFRPGDIIRAVVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWT
EMQCPLTGQIEQRKVAKVGG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcggcggcggcggaggtggtggtggtgacgccaggagaagtgctggga
aaagcaacccaagtgagagcagggagaggcgcttacgtggctcctcacaacaacttggtc
tacgcttccctcactggtttccgccgcaccctatcccctccccctaactccctcgaccag
agacccactgtggaagtaactggtcacaaagcccatggtgcggttcccgaacccggatcg
gttgttattgcaagagttactagagtaacagccagaatggcttcagctgatattttgtgt
gtcggtcccaagtctgttcgagaaaaatttactggatcaatcaggcagcaagatgttaga
gcaactgagattgataaagtggatatgcacttatcttttcgccctggtgacattattaga
gctgttgtgctgtcccttggagatgcacgggcttattatctatcaactgcaaagaatgaa
ctgggtgttgtgtctgcggagagcgcagcaggtgaaacaatggttccaataagttggacc
gagatgcagtgcccattaactggtcaaattgagcaaagaaaggttgctaaggttggaggt
tga
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