Quercus suber (cork oak): 112038762
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Entry
112038762 CDS
T05868
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112038762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112038762
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112038762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
112038762
NCBI-ProteinID:
XP_023927371
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MISDVAQDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEEARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVTDAVEFVL
QNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHVLSQIEGIDLDMYKDGVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGACPLLEPSVDIKTVLSQLME
RLSNYAASSTEVLPEFLQVEAFSKLSNAIGKVIEAQVDMPTVGVVTLYSSLLTFTLHVHP
DRLDYADQVLGSCVKKLSGKGKITDSKATKQIVALLSAPLEKYNDIVTALKLSNYPHVME
YLDNETNKVMSTVIIQSIMKNKTCISTSDKVEALFELVKGLVKDLDGTLHDEIDEDDFKE
EQNSVSRLIQMLYNEDPVEMFKVICTVKKHILTGGPKRLPFTVPPLVFSCLKLVRQLQGQ
EENPFGDETSTTPKKIFQLLNQTIEALSIVPAPELSLQLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQENMKDGERVLLCLKRALRIANAAQQMTNATRGSTGSVTLFVEILN
KYLYFFEKGNPQITISTIQGLIELITTEMQSDSTTPDPAADAFFASTLRYIQFQKQKGGA
VGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagacgtagctcaagacgaagagaaatggttggccgctgggatcgccggtctc
caacagaacgctttctacatgcaccgcgctctggactcgaacaatcttcgagatgccttg
aaatactcggcacagatgctctccgagcttcggacttcgaagctttcccctcacaaatac
tacgaactctatatgcgtgcattcgatgaattgaggaagttggagatgttcttcaaggaa
gaggctcgtcgtggctgctccattatcgatctgtacgagcttgttcaacacgccggtaac
attttgcccagattgtatttactttgtacagtaggatccgtatacattaaatctaaggaa
gctcctgctaaggatgttcttaaagatctagtcgaaatgtgccgcggcattcagcatcct
ctacgtggcctctttctaaggagttacctttctcaagtcagtagggataaattacctgat
attggttctgagtatgaaggagatgctgacactgttacagatgctgtagagtttgtactc
caaaacttcacagaaatgaacaaactttgggtgcggatgcaacatcagggacctgcccgg
gataaggagaaacgggagaaagaaaggagcgagctgcgtgatcttgtggggaagaacctg
catgtcctcagtcagattgagggtattgaccttgatatgtacaaagacggtgtccttcct
agagtcctggagcaggttgtaaattgtaaagatgagcttgctcaattctatttgatggat
tgcataattcaagtctttcctgatgagtatcacttgcaaacacttgatgtacttttgggt
gcttgccctctgcttgagccatctgttgacatcaagacagtgctatcccagttaatggaa
aggctttccaattatgctgcttcaagtacagaagtgttgcctgagttcttgcaagtagaa
gctttttccaaattgagcaatgccatagggaaggtgatagaagcacaagttgacatgcct
actgttggagttgtaactctatattcttctcttcttacgttcactcttcatgtccaccct
gatcgactcgattatgcagatcaagtgttgggttcatgtgtcaagaagctctctggcaaa
ggaaagattaccgatagcaaagcaacaaaacagattgttgcacttttaagtgctccactt
gagaaatataatgatattgtcactgccttgaagctttcaaactatccccatgtcatggaa
tacctggacaacgaaacaaacaaagtcatgtcaactgttataattcaaagcataatgaaa
aataaaacttgtatttctacttctgataaggttgaggcattgtttgaattagtgaagggg
cttgttaaggatttagatgggactcttcatgacgagattgatgaggatgatttcaaggag
gagcagaattctgtttcacgtcttattcagatgctttacaatgaagatcctgtagaaatg
ttcaaggttatttgtactgtgaagaagcatattttgactggaggaccaaagcggctacca
tttactgtacctcctcttgttttctcttgtcttaagttggttaggcagttacaaggccaa
gaagaaaatccttttggagatgagacatcaactacaccaaagaaaatttttcaacttttg
aatcagactattgaggctctgtcaattgttccagcacctgaactgtcgttacagttatat
ctgcaatgtgctgaggctgcaaatgactgtgatttagaacctgttgcttatgagtttttc
acccaagcatatattctgtatgaagaagaaatttcagattccaaagcacaggtgactgca
atacatttaataatagggactcttcagaggatgcatgtcttcggcgttgagaacagggat
actttaacacacaaggccacggggtattctgcgaagcttttaaagaaacctgatcagtgt
agagctgtttatgcatgctcgcatctcttctgggttgatgatcaggagaatatgaaagat
ggagagagagttctgctttgcctaaagcgcgcattaagaattgcaaatgctgctcaacaa
atgaccaatgcaacacgaggtagcactggatcggtgacactatttgttgagatactaaac
aagtacctttatttctttgagaaagggaatccccagatcactatttctacaatccagggc
ctgattgaattaattacaactgaaatgcaaagtgactccaccacaccagatccagctgca
gatgctttctttgccagcacactacggtacattcagttccagaaacagaaaggcggtgca
gtgggagagaaatatgagcccatcaaggtgtga
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