Quercus suber (cork oak): 112039410
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Entry
112039410 CDS
T05868
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112039410
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112039410
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Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112039410
NCBI-ProteinID:
XP_023928053
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MHTVAMAEVNKNCFLLFFFVSFVVIIPTIHANIAEYDDYWKQRAAQAEKDNHEAYNPDPE
EVTNSFNSHVHKALDGANSTRRQLRKYKGPCVATNPIDRCWRCDPDWYKHRKRLTKCVLG
FGHKTIGGKKGKYYVVTDSSDDDMVNPKPGTLRHAVIQKKPLWIVFARSMVIRLNQELIM
TGHKTIDGRGANVRIANGAGITLQFVKNVIIHNIHIHNIVAGSGGTIRDSTDHVGFRTPS
DGDGISIFGSSKIWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASESFS
GDKIMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSSPTIISQGNRF
IAPPNLAAKEVTKRDYAAQDVWQNWRWRSQGDLMMNGAFFVQSGAPLKTHGFSKKQLIKS
KPGTYVTRLTRFSGTVMCRKGIPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtagcaatggcagaagtgaacaaaaattgctttctgctcttcttttttgta
tcatttgttgtaatcatcccaaccattcatgccaacattgctgaatacgatgattactgg
aagcaaagagctgcccaagccgaaaaagacaaccatgaagcctataatcctgatcctgag
gaagtcacaaatagcttcaactctcatgtccacaaggctttggatggcgccaacagcaca
agaagacaattgagaaagtataaaggcccatgcgtggccaccaatcctattgatcgatgc
tggaggtgcgaccccgattggtacaaacaccgcaagaggctaactaaatgtgtccttggc
tttggccacaagactattggtgggaaaaagggaaagtactatgtggtcacagattcctca
gacgatgacatggtcaatcccaaacctgggactctcagacatgctgtgattcaaaagaaa
cccctctggattgtgtttgcacgcagcatggtcattaggcttaatcaggagctaatcatg
actggacacaaaaccattgatggtaggggagctaatgttcgtattgctaatggtgctggc
attactctccaatttgtcaagaatgtgatcatccataacatccatatccataacattgtt
gctggaagtggtggaactataagggatagtactgaccatgttggttttaggacccctagt
gatggtgatggtatctctatctttggttcatccaaaatctggatcgaccatgtttccatg
tctaattgccaagatggtctcattgatgccatcatgggttcaactgccattaccatctcc
aattgccatttcacccaccacaatgaggtgatgttgtttggtgcaagcgagagcttctct
ggcgacaagataatgcaaattacagttgctttcaaccatttcggccggggattggtgcag
cggatgccaaggtgccgatggggattcgtccatgtggttaacaatgattacactcactgg
ctcatgtatgccattggtggtagcagcagtcctactataatcagccagggtaatcgattc
atcgctcctccaaacctggctgctaaagaggtgaccaaaagggactatgcagcacaggat
gtctggcagaattggagatggaggtcacagggtgatctgatgatgaatggtgcattcttc
gttcaatctggggctccacttaaaactcatggtttctcaaagaagcaattgatcaagagt
aaacctggcacatatgtgacaagactcactcgcttctcgggcacagtaatgtgcagaaag
ggcataccttgttaa
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