Quercus suber (cork oak): 112039434
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Entry
112039434 CDS
T05868
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112039434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112039434
03110 Chaperones and folding catalysts [BR:
qsu03110
]
112039434
03029 Mitochondrial biogenesis [BR:
qsu03029
]
112039434
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qsu04147
]
112039434
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112039434
Messenger RNA biogenesis [BR:
qsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112039434
Chaperones and folding catalysts [BR:
qsu03110
]
Heat shock proteins
HSP60 / Chaperonin
112039434
Mitochondrial biogenesis [BR:
qsu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112039434
Exosome [BR:
qsu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112039434
Exosomal proteins of other body fluids (saliva and urine)
112039434
Exosomal proteins of breast cancer cells
112039434
Exosomal proteins of colorectal cancer cells
112039434
Exosomal proteins of bladder cancer cells
112039434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
MGAT2
Motif
Other DBs
NCBI-GeneID:
112039434
NCBI-ProteinID:
XP_023928076
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MYRFASSLASKARLARNTTQQIGSRLSSSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVASATNDAAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVNHLKSSARKISKSDEIAQVGT
ISANGEREIGELIARAMERVGKDGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISSLNAIIKVLELALKRQRPLLIISEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSNLQDLAILTGGELITEELGMNLEKVDLDMLGSCKKVTISKDD
TVILDGAGDKKALEERCEQIRSAIENSTSDYDKEKLQERLGKLSGGVAVLKIGGASETEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLETANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVVVGKLLEENDPDKGYDAAKGEYVDMVKAGIIDPVKVIRTALVDAA
SVSSLMTTTEAIVTEIPKDDKEAPAMGGGMGGMGGMDY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcctcaagtctcgcctctaaagctcggcttgctaggaacacaacccag
cagattggtagtagattgagttctagtagaaactatgccgccaaagatataagatttggg
gtggaggcccgggctctgatgctaaagggtgtggaagagcttgctgatgctgttaaggtc
accatgggtcctaagggacgtaatgttgtaattgaacaaagttggggtgccccaaaagtg
acaaaggatggtgtcactgtagcaaagagcattgaattcaaggacaaagtcaagaatatt
ggtgctagccttgtgaagcaggttgcaagtgccaccaatgatgcagcaggggatgggacc
acatgtgccacagtacttacacgggcaatatttaccgaagggtgcaaatcagttgctgca
gggatgaatgcaatggacctaagacgtggtattagcatggcggttgattctgttgttaat
catttgaagagtagtgcacgaaagatcagcaaaagtgacgaaatagcacaggttgggaca
atatctgcaaatggagagagagaaattggtgagttgattgcaagggcaatggagagagtt
ggcaaagatggagtaatcacaattcaagatggaaaaacattgtacaatgagttggaagtt
gttgagggcatgaagctcgaccggggttacatatccccttacttcattactaaccaaaaa
aaccagaaatgtgaactggaagaccctctcattctaatccatgagaagaaaatctcaagt
ttaaatgccatcattaaagtattagaactggctttgaagagacaaaggccgttactaatt
atttcagaagatgtggaaagtgaggctttggcaactctcattctcaataagcttcgtgct
ggaatcaaggtttgtgctatcaaagcccctggttttggtgaaaacaggaagtccaatctg
caggatcttgccattcttacaggaggcgaacttattactgaagagcttggcatgaatctt
gaaaaagtggatctggatatgcttggctcatgcaaaaaggttacaatatcaaaggatgac
actgttattcttgatggtgctggggacaagaaggctcttgaggaaagatgtgaacagatc
cggtccgcaattgaaaatagcacctctgattatgacaaagaaaagttacaagagagattg
ggaaagctttctggtggtgtagcagttttgaagattggaggagctagtgaaactgaagtt
agtgagaagaaggatagagtgactgatgccttaaatgccacaaaggcagctgttgaagag
ggtatagtgccaggtggtggtgttgctcttctttatgcatcaaaagagttggaaaagctg
gaaactgccaactttgatcagaagattggtgttcagattattcagaatgcgttgaagaca
cctgtgtacacaattgcttctaatgctggagttgagggggctgttgttgttggtaagctg
ttggaagaaaatgaccctgacaaaggatatgatgcagccaaaggtgaatatgttgatatg
gtcaaagccggaataattgatccggtgaaagtgattagaactgctctggttgatgctgca
agtgtatcatccttgatgacgaccactgaagctattgtgactgaaatacccaaggatgat
aaagaagctccagcaatgggaggtggcatgggtggcatgggtggcatggattattga
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