Quercus suber (cork oak): 112039464
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Entry
112039464 CDS
T05868
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112039464
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112039464
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
112039464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
DExH14_plug
ResIII
Helicase_C
RVT_1
AAA_22
DEXQc_Suv3
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
112039464
NCBI-ProteinID:
XP_065627570
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MLVQLPRLTNSLRNPFDVDQAYLHRKLILENLNKPRNSASTIDESELARKIVYQWEEASS
EVRQAYKQFIVAVVELIDGEVPSEAFREVALTAYRLFGPVEEDNVDRNIAEKKLDLQKLL
GHMVSDANLRRVASLAQNLFRLQPSDHGPPLVSEWHVNGSGDDIEFGADLVFQAPARFLV
DVSLEDGELLGEERTVPSLFHEGWYEHDSSPHYPSASDGGNYNLSWLRDACDRIVGGSTS
LLSRDELAMAICRVLDSEKPGEAIAGDLLDLVGDGAFETVQELVLHRKELVDAIHHGKLV
LKSEKTTSNTQSRMPSYGTQVTVQTESERQIDKLRRKEEKRHRRGTEYGVESDLSAANFS
SLLQASERKSPFDDLIGSGPGPLSLAVTALPQGTVRKHYKGYEEVIIPPLPTAEMKPGEK
LIEIKELDDFAQAAFRGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISILHE
IGQHFKDGYLHKKEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
SQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYVGISEQNYLARN
ELLNEICYKKIVDSLRQGHQAMVFVHSRKDTAKTAQKLVELGRKFDDLDLFSNDKHSQFD
LIKREVVKSRNKDLVELFEYGIGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVN
LPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYL
RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGW
DEMQVIYIAPLKAIVRERMNDWKKRLVSQLGKEMVEMTGDYTPDMMALLSADIIISTPEK
WDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAVRFVGLS
TALANAGDLADWLGVGEIGIFNFKPSVRPVPLEVHIQVVTSSQTEVFSRMLRRVEGAGLI
RGFKVEERRGGGECVSHLLFADDTILSCDADVEQILHIQLLSLCFQAVTGLKVNVQKSEM
VPIGEVHDVHALAEILGCKVGTLPMTYLGIPLGAAHNSPSIWNPILEKIEQKLAGIEKLQ
RNFLWSDSKTHLVGCDKVCAPIANGGLGIRKLTTFNKALLGKWLWRFGKEENRLWRRVVA
SKFGDEWGGWTSKLGRGVHGCGLWRDHESYARQESTAFKFMLFWQLTILSFHCEILFFSI
LLRKPVFLLQGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFY
KKFLYEPFPVESSLRERLHDHINAEIVSSTICHKEDAVHYLTWTYLFRRLTVNPAYYGLE
STDSEIISSYLSRLVQNTFEDLEDSGCIKMSDDIVEPMMLGSIASQYYLSYMTVSMFGSN
IGPDTSLEVFLHILSAASEYNELPVRHNEENYNEALSERVRYMVDKNRLDDPHVKANLLF
QAHFSQLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMIMQGLW
FDEDSNFWMLPSMNVDLASSLNKRGISNVQQLLDLPKATFQTVVGNSPASRLNQDLQHFP
IVQVRLKLQKRDTDGAKSPTLTIRLEKINFKRNKSRAFTPRFPKVKVEAWWLVLGNTSTS
DLYALKRISFSDRLVTHMELPSTLGSLQGMKLILVSDCYLGFEQEYSLEDLH
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgttggtccaacttcctcgcttgactaactctctgagaaaccccttcgatgtcgaccag
gcctatctccatcggaaactcatcctcgagaacctcaacaagcctcgaaattctgcgagc
acaattgatgaatctgaacttgcacggaaaattgtatatcaatgggaagaagcttcttct
gaagttcgacaagcatataaacagttcattgtggcggtagtggagttgattgatggagaa
gtgccctctgaagcatttcgtgaggtggcactcactgcttatcgtctttttggtccagtg
gaggaggacaatgttgatagaaatattgctgagaagaagttggacttgcaaaaacttctt
ggtcacatggtttctgatgctaacctgcggagagttgcctctctagctcaaaatcttttt
agattgcagcctagtgaccatgggcctccacttgtttcagagtggcatgtaaatgggagt
ggtgatgatatagaatttggagctgacctcgtttttcaagcacctgctcggtttctggta
gatgtttctttggaggatggggaattattgggtgaggaaaggactgtaccttctttgttt
catgaaggctggtatgaacatgacagctctccacattacccttctgcttctgatggggga
aactataatttgagttggttaagagatgcatgtgaccggatagttgggggaagtacttcc
ctgctttcacgcgacgaactggcgatggccatttgccgggtgcttgattcagaaaaacct
ggggaggcgattgctggtgatttgttggatcttgttggggatggtgcattcgagactgtt
caagaacttgtattgcatcggaaggaacttgttgatgctatccatcatggtaagcttgta
ctgaaatctgaaaaaacgacttcgaatacacaatcaagaatgccgagttatggcactcag
gttacggttcaaacagagtctgaaaggcaaattgataaacttcggcgcaaggaggaaaaa
aggcatagacgaggaacagaatatggggttgagagtgacttgtctgctgcaaatttttct
tctttacttcaagcaagtgaaaggaaaagtccatttgatgatctgattggatctggccca
ggacccctctcactagcagttactgctcttcctcaaggaactgtcaggaagcattataag
ggctatgaggaggtcatcatccccccattgccaactgcagaaatgaaacctggagagaaa
ctgattgagataaaggaattagatgactttgcacaagctgcttttcgtggctacaaatct
ctgaaccgcatccagagccggatatttcaaacagtttattacactaatgagaatatacta
gtttgtgctccaacaggagctggcaaaacaaatattgctatgatttctattctacatgag
attggtcagcacttcaaggatggttacttgcataaaaaagagtttaagatagtttatgtt
gctcctatgaaggcattagctgcagaggtcacttcaacatttagtcaccgtttatctcca
ctgaacatgactgtgagagaacttactggagacatgcaactttcaaagaacgaacttgaa
gaaactcagatgatagtgacaacacctgaaaagtgggatgtcattacgcgcaagagtagt
gacatgtcactttcaatgctggtgaagctcttaattatcgatgaagtgcatctcttgaat
gacgatagaggccctgtaatagaggcacttgttgctcggaccctccgtcaggtggagtca
tcacaaacaatgatacgtatcgtggggctttcagccaccctaccaaattatttggaggtg
gcacaatttctgagagtgaatccagaggcaggactcttcttctttgattctagttatcgt
cctgtgcctcttgctcaacaatatgttggaattagtgagcagaactatttagctcgcaat
gaattgctgaatgagatttgctataaaaagattgttgattcattaaggcaaggtcatcag
gcaatggtgtttgttcattcacgtaaggacacagcaaaaacagctcagaaattggttgaa
cttggccgaaaatttgatgatcttgatctctttagcaatgataaacattcacagtttgac
ttaatcaagagggaagtagttaagtctagaaacaaagatcttgttgaacttttcgaatat
ggaattggtgttcatcatgccgggatgctacgtgctgatagaggtttgactgagcggctt
ttctctgatggactcttgaaggtacttgtttgtacagcaactttggcatggggtgtaaat
ttgcctgctcacactgttgtgatcaaggggacacaattatatgatccgaaggctggtggg
tggcgagatctaggcatgcttgatgttatgcagatctttggacgggctggtagacctcaa
tttgacaaaagtggtgaaggcatcatcatcacatcccatgacaaactagcctactatttg
cggttgctgacgagtcaactccccattgaaagccagtttattagctccctaaaagataat
ttaaatgcggaagtagctttgggtacagtcactaatgttaaggaagcttgtgcatggctt
ggatatacatatctttttataaggatgaggttgaatccgttggcatatggtatcggatgg
gatgagatgcaggttatttatatagcaccattgaaggctattgttcgggaaagaatgaat
gattggaaaaagcgtcttgtctctcagcttggaaaggagatggttgaaatgactggagat
tatactccagatatgatggccctcttgtcagctgatatcataatatctactcctgagaag
tgggatggtatcagtcgtaattggcatagtcgaagctatgtcacaaaggttggtcttatg
attttggatgagattcacttactgggagctgatcgtggtcctatccttgaggttattgtt
tcaaggatgagatatatatcctcacaaacagagcgggcagtacggtttgtaggcctttca
acagctttagcaaatgcaggtgatttggctgattggttgggcgttggggaaatcggtatc
ttcaatttcaagccaagtgtgaggcctgtacctcttgaagttcatatccaggtagttact
tcttctcagactgaggtttttagtaggatgttgagaagagtggaaggagctggcttaatc
cgtggttttaaagttgaggaaaggaggggtggtggggaatgtgtttcacatctattgttt
gcagatgacactattctttcttgtgatgcagacgtggagcaaattcttcatattcagttg
ttgtcactttgttttcaggctgtaacgggtttgaaagtcaatgtgcaaaagagtgaaatg
gttccaataggggaggtacatgatgtgcatgccttggctgaaattttgggctgcaaagtt
ggaactttacccatgacttatcttggcataccactaggggctgcgcataactctccttca
atttggaatcctatcttggaaaaaattgagcagaaattggccggaattgaaaaactgcaa
aggaattttctatggagtgatagtaagacccatttggtaggatgtgataaagtttgtgca
cccatagctaacggtggtttaggtataaggaaacttaccacattcaataaggcattattg
gggaaatggttgtggcggtttgggaaagaggagaatcggctatggaggagggtggtagct
tcaaagtttggggacgagtgggggggatggacttctaagttaggtaggggagttcatggg
tgtggtttgtggagagatcatgagtcttatgctaggcaagaaagtactgccttcaaattc
atgctattctggcagctcacaatactctctttccattgtgagatcctttttttctccata
ttgttaagaaaacctgtgtttctgttgcagggaacagaatattatgatggaaaagcaaag
agatatgttgattttccaatcacagatatcttgcaaatgatgggtcgggctggccgccca
caatttgatcaacatgggaaagcagtcattcttgttcatgaacccaaaaagagcttctat
aaaaagtttttgtatgaaccatttccggttgagagtagtctcagagagcggttgcatgat
cacatcaatgcagagatagtttccagcacaatttgccataaggaggatgcagtgcattac
cttacctggacttatttattccgtagactgacggttaatcctgcttactacggcttggag
agtacagattctgaaattataagttcttatttatctcggttagtgcaaaatacatttgag
gatctggaagacagtggatgcatcaagatgagtgacgacattgtggagcctatgatgttg
ggctcaatagcttctcagtattacctcagctacatgactgtttctatgtttggttcaaat
attggtccagacacgtcgcttgaagtgtttctgcatattctttctgctgcttctgagtac
aatgaacttcctgtgcggcataatgaggaaaattacaatgaagcattgtctgaaagagtt
cgatatatggtggataagaatcgccttgatgatccacatgtcaaagcaaatctgctattt
caggcacatttttctcagttagaattaccaatcagcgactatgtcacagatttaaagtca
gtgttggatcaaagtatacgtatcatccaggccatgatagatatatgtgcaaacagtgga
tggctatcaagctcaattacttgcatgcgtcttttacaaatgatcatgcagggtttatgg
tttgatgaggattccaatttttggatgttgccatccatgaatgttgatcttgcaagttca
ttaaacaaaagaggaatttccaacgtgcagcaactgttggatcttccaaaggctactttc
cagactgtggttggaaattctcctgcttcaagattgaatcaggatttgcagcattttcct
attgttcaagtgagattaaaacttcagaaaagggacactgatggtgcaaaatcccctact
ctaaccatcagattggagaagatcaatttcaaacggaacaaatcaagagcttttaccccc
cggtttcccaaggttaaagttgaagcatggtggttggttcttggtaacacctccacctct
gacttatatgctctgaaaaggatttctttctctgatcgcttagtcacccacatggagtta
ccatcaaccctgggcagtctccagggtatgaaattgattttagtttcagattgttatctt
ggttttgaacaagaatactccctcgaagatcttcattga
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integrated database retrieval system
