Quercus suber (cork oak): 112040745
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Entry
112040745 CDS
T05868
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03030
DNA replication
qsu03410
Base excision repair
qsu03420
Nucleotide excision repair
qsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112040745
03410 Base excision repair
112040745
03420 Nucleotide excision repair
112040745
03430 Mismatch repair
112040745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsu03032
]
112040745
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112040745
DNA replication proteins [BR:
qsu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112040745
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112040745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
RCF1-5-like_lid
AAA_22
AAA_30
Rad17
AAA_19
Gp44_lid
AAA_18
nSTAND3
RuvB_N
AAA_5
AAA_assoc_2
Zeta_toxin
AAA_24
Sigma54_activ_2
AAA_14
AAA_16
AAA_28
RsgA_GTPase
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
112040745
NCBI-ProteinID:
XP_065630383
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MAENKQADIRKWFMKSHDKGNAKESKPAIPAPTNKSQPEKPAHASPESSGRRKTSKYFAT
DKQKPKDEKETEELPTKRKAQKHNDESVKPPPAKKVHIVDDDDDDDFVFSSSRKKSNDVT
PSKKLKSGLGRGIAQKPVDIEEGDEDDDKDFETPLKSSGRGRGGRGSSAAPAGGRGRGGA
QKPVAIEEGDEDDDKDIETPLKSGGRGRGGRGSSAAPAGGRGRGGGRGGFMSFGERKDPP
HKGEKEVPEGAPDCLAGLTFVISGTLDRPHFALRYKKXDDDDDDFVFSSSRKKSNDVTPS
KKLKSGLGRGIAQKPVDIEEGDEDDDKDFETPLKSSGRGRGGRGSSAAPAGGRGRGGAQK
PVAIEEGDEDDDKDIETPLKSGGRGRGGRVSSAAPAGGRERSSCIIPWFYLTYVGKLIIL
EDSIGNSLATNVSGKGLTSGVSPAKHKTKTVAKSDLTWTEKYRPKVPNDIIGNQSLVKQL
HDWLTNWNEQFLDTGNKKKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEV
NASDSRGKADAKIEKGIGGSNANSIKELVSNEALSVNMDRSKHPKTVLIMDEVDGMSAGD
RGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQIATA
EGLQVNQIALEELAERVNGDMRMAINQLQYMSLSMSVIQYDDIRQRLLSSAKDEDISPFT
AVDKLFGYNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSAGKDDNGIKRMNLIAR
AAESIGDGDIFNVQIRRYRQWQLSQSSSLASSIIPAALLRGQREILQQGERNFNRFGGWL
GKNSTMGKNLRLLEDLHVHILASRESSSGRETVRVEYLTLVLKRLTGPLRELPKDEAVQK
VVEFMNIYSISQEDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEGSKTRMVRAADL
VTLPGVKKAPKKRIAAVLEPSDDGLVDGGSTLAEGEEENSSDTDELEGSANGEKLQMELQ
SLNSKGMQVELDLKGTGNSSAKKTPAGRGKGGSGSSEKKGARGSGAGAKRKR
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaataagcaggcagatataaggaagtggtttatgaaatcccatgacaagggc
aatgccaaggaatccaagcctgcaattcctgccccaaccaataaatcacagcccgaaaaa
ccggctcatgcaagcccagaaagttcgggtagaaggaaaactagcaagtattttgctact
gacaaacaaaagccaaaagatgaaaaggagacagaggaacttccaacaaaacgaaaggct
caaaagcataatgatgaatcagttaaacccccacctgctaaaaaagttcacatagttgac
gacgatgacgatgacgactttgtcttttctagttctaggaagaaatcgaatgatgtgact
cctagtaagaagttgaaaagtggcttgggtaggggaattgcacagaaacctgtagacatt
gaagaaggtgatgaggatgatgataaagattttgaaactcctcttaagtctagtggaagg
ggacgtggtggaagaggttcatcagcagcaccagctggtggaagaggcagaggtggtgca
cagaaacctgtagccattgaagaaggcgatgaggatgatgataaagatattgaaactcct
cttaagtctggtggaaggggacgtggtggaagaggttcatcagcagcaccagctggtgga
agaggcagaggtggtggacggggtggatttatgagctttggagaaaggaaagatccccca
cataaaggagaaaaggaagtccctgagggtgctcccgattgtttagctggtttaactttt
gtaattagtggaacacttgacagaccacattttgctttaagatataaaaaatangacgat
gacgatgacgactttgtcttttctagttctaggaagaaatcgaatgatgtgactcctagt
aagaagttgaaaagtggcttgggtaggggaattgcacagaaacctgtagacattgaagaa
ggtgatgaggatgatgataaagattttgaaactcctcttaagtctagtggaaggggacgt
ggtggaagaggttcatcagcagcaccagctggtggaagaggcagaggtggtgcacagaaa
cctgtagccattgaagaaggcgatgaggatgatgataaagatattgaaactcctcttaag
tctggtggaaggggacgtggtggaagagtttcatcagcagcaccagctggtggaagagaa
cgaagtagttgcattattccttggttttatcttacatatgttggcaaattgattattcta
gaagatagcattggcaactcgttggcaacaaatgtatctggcaaaggattgacctcaggg
gtgtccccagctaagcataaaactaaaacagttgcgaagagtgatttaacatggacggaa
aaatatagaccaaaggttccaaatgatattattggaaatcagtcactggttaagcaactt
catgattggttgacaaattggaatgagcaatttcttgatactggaaataagaaaaaggga
aaaaaacaaaatgattctggtgccaaaaaagctgtgctattaagtggaactcctggtata
ggaaaaactacctctgcaaagttggttagtcagatgctcggtttccaggcaatagaggta
aatgctagcgacagtcgtgggaaggctgatgccaaaattgagaaaggaattggtggaagc
aacgcgaattctataaaggaacttgtcagcaatgaggccttgagtgtcaacatggatcga
tcaaagcatccaaaaactgtgctgattatggacgaggttgatgggatgtctgctggagat
aggggtggaattgctgaccttattgctagcatcaagatttccaaaattcctattatctgc
atttgtaatgatcgatacagtcagaaactaaaaagtcttgtgaactactgtttgcttctc
agctttcgaaaacctacgaaacagcagatggcaaagaggttaatgcaaattgcaactgca
gaagggcttcaagttaatcagattgctcttgaggaacttgcagaaagagttaatggagat
atgcgcatggcaataaaccagttgcagtatatgagcctctccatgtcagtcattcaatat
gatgacattaggcagcgtcttcttagcagtgcaaaggatgaagatatttcacctttcact
gctgttgacaagctgtttggttataatgcggggaagttgaggatggatgagcggattgac
ctgagcatgagtgatcctgatctagtccctcttcttattcaggaaaattatattaattac
aggccaagttctgctggtaaggatgacaatggaatcaaacgtatgaacttgattgcccgt
gctgctgaatccattggtgatggggatattttcaatgttcaaattcgacggtatcgacag
tggcaactctctcaaagtagttcacttgcatcgtctataatccctgctgcactgttgcgt
gggcagagggaaatacttcaacagggagagaggaattttaatagatttggagggtggctg
ggaaagaactcaacaatgggtaaaaatctgaggcttttggaggatttgcatgttcatatt
ctcgcttctcgtgaatctagttcggggagggaaaccgtgcgagtagaataccttactctt
gtcctgaaacgattgactgggccactgcgggagctgcctaaggatgaagcagttcaaaaa
gttgttgagttcatgaatatatactcaattagtcaggaggatttcgatacaattgtggag
ctatcaaaatttcaggggcatccaaatccactggatggcatacagcctgctgtgaaagct
gctctcaccaaagcttacaaagaaggaagcaaaacaagaatggtacgagctgcagattta
gtcacacttcctggagtgaaaaaagctcctaaaaagcggattgcagcagttctggagcca
tctgatgatggattagttgatggtggtagcacattggcagaaggtgaagaagaaaattct
tcagatacggatgagcttgaaggttctgccaatggtgagaagctacagatggaacttcag
agtttgaattcaaaaggaatgcaagtggagttggatctcaagggcacaggaaattcaagt
gctaagaaaacaccggctggcagaggaaaaggtggttccggatcttcagaaaagaaaggt
gcacggggttcaggggctggtgccaagagaaagagatga
DBGET
integrated database retrieval system
