Quercus suber (cork oak): 136061658
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Entry
136061658 CDS
T05868
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03020
RNA polymerase
qsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136061658
09124 Replication and repair
03420 Nucleotide excision repair
136061658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
136061658
03400 DNA repair and recombination proteins [BR:
qsu03400
]
136061658
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136061658
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136061658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
136061658
NCBI-ProteinID:
XP_065615762
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MDGGMSYQRFPKVKIREMKDDMVKFELRETDASVANALRRVMIAEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCLTDQTLD
VTSKDLYSSDHTVVPVEFSDPNDAGEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP
AATVTFMYEPMIRINEDLMETMSLEEKRTWIESSPTKVFDIDPVTQQVVVVEPELYTYDD
EVIKKADAMGKSGLVEIEAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSDDT
VEADDQFGELGAHLRGG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggaatgtcgtaccagcgattcccgaaggtgaagatcagggaaatgaaggat
gacatggtcaagttcgagctacgagagacggacgcgagtgtggccaacgcgcttcggcgc
gtgatgatcgcggaggtcccgaccgtcgccatcgacctcgtcgaaatcgaggtcaactcc
tctgtcctcaacgacgagttcatcgctcaccgactcggtctcatcccgctcaccagtgac
cgagccatgagcatgcgcttctcgcgtgactgtgacgcttgcgacggtgacggccagtgc
gagttctgctccgtcgagtttcacctccgggcaaagtgcctcactgaccaaaccctcgat
gttaccagcaaagacctttacagctccgaccacaccgtcgttcctgttgagttctccgat
cccaatgacgctggcgagcaaaggggaattataattgtgaagttacgccgtggacaagaa
ctgaggctgagggctatagccagaaaagggattggtaaagatcacgcaaaatggtcacct
gcagctactgtcacatttatgtacgagccaatgattagaatcaatgaagacttgatggaa
acaatgtcactcgaggagaaaagaacctggattgaaagtagtcctaccaaagtttttgac
atagatcccgttacccaacaggtagtagtggttgaacctgagttatacacttatgatgat
gaagtgatcaagaaagcagatgctatggggaagtcagggcttgtggagattgaagccaaa
gaagacagttttatattcaccgtagaatctactggtgcaatcaaagcttctcagttggta
ctcaatgccatagaaatcctcaaacaaaagctggatgcagttcgcctgtcagatgatact
gtagaagctgatgatcagtttggcgaactaggtgctcatttgcgaggaggatga
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integrated database retrieval system
