Quercus suber (cork oak): 136065310
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Entry
136065310 CDS
T05868
Name
(RefSeq) protein ALTERED SEED GERMINATION 2-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsu04121
]
136065310
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136065310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_SCAP
TPR_2
EIF3I
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EML
Rapsyn_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
136065310
NCBI-ProteinID:
XP_065624417
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
YAYVVFEFTAGRSAMQYTPGDVSKLMSFSPILNGVELQPPVSNVFPSHLPRKNNVAATRE
KCRRLIQIAEKCLEEATNYFYGIEACSEVLDGYVHDVGPMLKCECLCLRAALLLQRKWKN
DAHMAVRDCYNARRIDNSSFQAHYYMSEALSQLGKHKEALEFALTAQILSPSNSKAVDRV
DNVKRDLAAVEAEKNKANDGLPRSESRGGRVLSLSDILYRSEANSDASQDGPRSEREDSD
YDEEVELDFETSISGDEGRDVESNILHGSLNVRFHRRGDSGRESVGANGICGSPSSSSQN
DRIPYLPEVAIDMKQRYVGHCNTGTDIKQASFLGQKGEFVASGSDDGRWFIWEKRTGRLI
KMLLGDDAVVNCVQCHPYDSVVATSGIDNTIKIWTPTASVPSIVAGGADRPETADILVAM
ENNQRKLSRNREAILPFEIFERFRMHEFREGTFHPFECTQS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
tatgcttatgtggtttttgaattcacagcaggcaggagtgctatgcaatatactccagga
gatgtttcaaaattgatgagcttcagtcctatactcaacggggtagaattgcagccgcca
gtgtccaatgtcttcccaagtcaccttcctaggaaaaacaatgttgctgccacgagagaa
aagtgcaggagactaattcaaattgcggaaaaatgcttagaggaggcaacaaattatttc
tatggcattgaggcatgcagtgaggttttggatggatatgttcatgacgttgggcctatg
ctaaagtgtgaatgtctatgtctacgtgctgctttgttgctccagaggaagtggaaaaat
gatgctcatatggccgtaagagattgttacaatgctagaagaattgataattcctctttt
caagcacattactatatgtctgaagctttatcgcagttaggcaaacataaagaggctcta
gaatttgcccttacagctcaaattttgtccccatccaattctaaagcggtagacagagtg
gacaatgtcaaaagggatcttgctgcagttgaagctgaaaaaaataaagcaaatgatgga
ttgccaaggtctgaatcaagaggtggaagagtactctcattaagtgatatactctaccgt
tcagaagctaatagtgatgcttcgcaagatggtccaagatctgaaagagaagattctgat
tatgatgaggaagtggagttggactttgaaacttcaatatcgggtgatgaaggacgtgat
gttgaatcaaacattcttcatgggagtttaaatgtgagatttcatcgaagaggtgattca
ggtagagaaagtgttggtgcaaatggcatatgtggatcaccttcatcatcatcacaaaat
gacaggataccttatctgcctgaggtagctattgatatgaagcagagatatgttggtcac
tgtaatactggaactgacataaagcaggccagttttcttggccagaaaggtgagtttgtt
gctagtggaagcgatgatggaagatggtttatctgggaaaagcgaactggtagactgata
aaaatgcttctgggagatgatgctgttgtgaactgtgtccaatgccacccatatgattct
gttgtggcaactagtgggattgacaacacaataaagatatggactccaaccgcttctgtc
ccatcaattgtagcaggtggagcagacagaccagaaactgccgatattctggttgccatg
gaaaacaatcaacgaaaattatcccgtaaccgtgaagctatactgccttttgaaattttt
gagcggtttcggatgcatgaatttagggaaggaacatttcatccgtttgagtgtacacag
agctaa
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