Quercus suber (cork oak): 136067923
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Entry
136067923 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC136067923
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsu03016
]
136067923
Enzymes [BR:
qsu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
136067923
Transfer RNA biogenesis [BR:
qsu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
136067923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
136067923
NCBI-ProteinID:
XP_065630450
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MEDIEDLVVGAGGAPPGFRLPLSSVGLKPKKKNNNPTKPNAKLSQIPGIQTIYIKTFGCS
HNQSDSEYMAGQLAAFGYSLSDSPEEADLWLINTCTVKSPSQSAMDTLIAKCKNAKKPLV
VAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRK
NKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVNTVIADGVKEIWLSSEDTG
AYGRDIGVNLPTLLNALVAELPPDASTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLH
VPVQSGSDAVLNAMNREYTVSEFRTVVDTLTDLVPGMQIATDIICGFPGETDEDFVQTVS
LVKEYKFPQVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTSVFEAFTPYNGMEGRLER
IWITEIATDGIHLVGHTKGYVQVLVIARESMLGTSAIVKITSVGRWSVFGEVIETINHIN
DESSLRNKKPSQAKCSPCSNPVESCACTREPEPCPCGPESCGDCGPESCGPTTIEESSVS
RNSMFAEDLNSRNLIGWLLRKRKNHVHKKVECEIALGSMKKQEWAQGSMGEWGVVDKALL
VGIFVSFLTIMALLIHLAVRTLAFN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaggatctggtcgtcggagccggtggtgctcctcctggttttcgattg
ccattgtcttctgttggactcaagcccaagaagaaaaacaacaaccccaccaaacctaat
gctaaactctctcaaatccctggcattcagacaatatatatcaagacctttgggtgctca
cacaaccagagtgacagtgagtatatggctggtcaacttgctgcatttggttattcatta
agcgacagtcctgaggaagcagacctgtggctgattaatacatgcacagttaaatcccca
agtcagtctgccatggacactctaatagcaaaatgcaaaaatgccaaaaagcccctggtg
gtggctggatgtgtaccacaaggaagtcgagacttgaaagagcttgaaggggtcagcata
gttggagtccagcaaattgaccgtgtggttgaagttgtggaagagaccctgaaaggtcat
gaggtgcggcttttgaaccgcaagacattgcctgctcttgaccttccaaaggtgagaaag
aacaagtttgtcgagattcttccaattaatgttggttgtttaggtgcttgcacttattgc
aagacaaagcatgctcgtggtcatttagggagctacacgattgatagccttgtcgggcgt
gtaaatactgtaatagctgatggagttaaggagatatggttgagcagtgaagatactgga
gcctacggccgtgacattggggtcaatcttccaactttgttgaatgctcttgttgctgag
cttcctcctgatgcaagcacaatgcttcggattgggatgacaaatcctccttttattctt
gagcacttgaaagagatagcagaggttttgcgtcacccatgtgtgtactcgtttctacat
gtaccagttcaatctgggagtgatgccgtcttgaatgcaatgaatcgggaatatactgtg
agtgagtttaggactgtggttgataccttgactgaccttgtgcctgggatgcagatagca
actgatatcatatgtggatttcctggtgaaacagatgaagattttgttcaaactgtaagc
cttgtcaaggaatacaagttccctcaagttcatatatctcagttttatcctcgaccaggg
acacctgctgcaaggatgaagaaggtcccaagtaatgtggtgaagaaacgaagccgtgag
ttgacttctgtttttgaagctttcacaccatacaatggaatggagggtagactagaaaga
atttggataactgaaattgcaaccgatggaattcacttggttggccataccaagggatat
gtgcaggtgctagtaattgctcgtgaaagtatgcttggaacctcagctattgtgaagata
acaagtgtgggaaggtggtcagtttttggagaagtgattgagaccatcaaccatatcaat
gatgaatcatctttaagaaacaagaagcctagtcaggctaaatgttcgccatgctctaac
cctgttgaaagttgtgcatgtacaagagagccagaaccttgtccttgtggacctgaaagc
tgtggagattgtggaccagaaagctgtggaccaactactattgaagaaagttctgtttca
aggaattccatgtttgcagaagatctaaacagcagaaatctgatcggatggttactaagg
aagcggaaaaaccatgtgcacaaaaaagtggagtgcgaaattgccttgggatccatgaaa
aagcaagaatgggcccagggaagcatgggtgaatggggtgttgtcgataaggctcttttg
gttggaatatttgtaagtttcttgacaattatggctttactgattcatcttgcagttagg
actctggcgttcaattaa
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