KEGG   Quercus suber (cork oak): 136070110
Entry
136070110         CDS       T05868                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136070110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    136070110
Spliceosome [BR:qsu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    136070110
 Complex B
    136070110
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 136070110
NCBI-ProteinID: XP_065635587
LinkDB
Position
Unknown
AA seq 364 aa
MSFVGKQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNT
AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT
LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDL
VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQENVL
LHAQQQIALQKLMLQPAAAVATKVVCLTQAVSPDELKDDDDYQDILEDMREECGKFGTLV
NIIIPRPQPNDEPSPGVGKVFLEYADIEGSTKARTGLNGRKFGGNSVVAVYYSENKFAQG
DYEG
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtcttttgttggaaagcagcaatttggagctcttcctgttatgccagttcaggcaatg
actcaacaggccacaaggcatgctcggcgagtgtatgttggtgggcttcctcctacagca
aatgaacagtctgttgcaacatttttcagtcatgttatggctgcaattggaggaaacact
gctggtccaggagatgctgttgtcaatgtttacataaaccatgaaaagaagttcgctttc
gtggagatgagatctgttgaggaggctagtaatgcaatggctttggatgggattatattt
gagggtgctcctgttaaggtgaggagacctagtgactacaacccatctcttgctgcaaca
cttggtccaagtcagcccaatcccaatctgaaccttgcagctgtagggttaacgccagga
tctgcaggtgggcttgagggtcctgatcgcatatttgtgggtgggcttccctattacttc
acagaaacacagatcagggagttgttagagacttttgggccacttcggggttttgatctt
gtgaaagacagagaaacgggaaattcaaaaggctatgcattttgtgtttaccaagatctt
tcagttacggacatagcttgtgcagctctgaatggaattaagatgggtgataaaactctt
actgttagacgtgctaaccagggtgctaatcaacctaaacccgagcaagagaatgtattg
ttgcatgcacagcagcagattgcattgcagaagctcatgttacaaccagccgctgcagtg
gccaccaaggttgtgtgtctaactcaggcggtttctcccgatgaactcaaagatgatgat
gattatcaagacattttggaagacatgagagaggaatgcggaaaatttggtacactggta
aatatcatcatcccacgcccacaacctaatgatgaaccatcacctggagtcgggaaggtg
tttttggagtatgcagacattgagggttctacaaaagctcgtactgggttgaatggaaga
aaatttggtgggaattcagtagtggccgtctattattcagagaataagtttgcccagggg
gactacgaaggctag

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