Quercus suber (cork oak): 136071028
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Entry
136071028 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC136071028
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
136071028
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
136071028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Retrotran_gag_2
Retrotran_gag_3
Motif
Other DBs
NCBI-GeneID:
136071028
NCBI-ProteinID:
XP_065637914
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MDYDPDDAGSLKSDGTNYLLWSYMMRNFEIEGELWDYISGLATRPDPKNKNYLNLIKHWE
SMNATARSIIDLHVDRSLKKLLANINSAKDAWDYLALLYAHHDESNLAKTYRLEREIEAV
KQSGFPLTGLYCFLQCYWQQLDEMEPKELSDLESYKKYREESRLVQLLMALPDIFDEDIR
KSMLERSPLPTVPEAVRELLFVEHRLTYDKFSSLSLHDKDFPAKKMNNDQTKRSYRSQKG
SPQFGGCQPSIQDPIEQSDRYYQPSSSSSRLASPLTPDNNQPALSTDQCDLHKSILKSQL
QSELSGQSPLECGIYVPPFRRERNSLSMVSSRVKILSYNVWFGDLEIHNRMEALGELIQL
HSPDVICFQEVTLDMYDIFKVSSWWNTYNCSVSHQMASTRRYFCMQLSKLPVKSFSCKPF
SNSTMLRELCMAEIEVRGKLLIVATSHLESPCPAPPKWDQMHSEERIAQAKEAVNLLKKF
PNVVFCGDMNWDENLDGKFPLSDGWIDAWADLRPGENGWTYDTVSNPMLSSNRPLQKRPD
RFICNLCDFKLSAIDMIGMEAIPGVSYKKGKKVRKGFQKSMLPVLPSGHYGLLLGVNVQ
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggattatgacccggatgatgctggttcactcaaatcggatggaactaattatctacta
tggtcatatatgatgcgtaatttcgagattgaaggagaactgtgggactatataagtgga
ttagcgactcgtcctgaccccaaaaataaaaattacttaaacttgattaagcattgggaa
tctatgaatgcaacagcacggtcaattatcgacttgcatgttgatcgttcccttaagaaa
cttttggctaatataaactctgccaaggatgcatgggactacttggcattgttgtatgcc
catcatgatgagtcgaatttggctaaaacgtatcggttggagagggaaattgaggctgtg
aaacaaagtggttttccccttactggattatattgttttttgcaatgttattggcagcaa
ttagatgagatggagccaaaggaattgagtgatttagagagttacaagaaataccgtgaa
gagtctcggctggttcagcttctcatggctttaccagatatatttgatgaggatattaga
aagtctatgctggaacgttcccctctaccaactgttcctgaagccgtgcgagagttgcta
tttgtggagcatagactaacatatgataaattttcatctctatcattacatgacaaagat
tttcctgccaagaagatgaacaatgatcagacaaagagaagctatagaagtcaaaagggt
tctccccaatttggtggatgtcagccatctatccaggatcctatcgagcagtcagacaga
tactatcagccatcttcctcttcgtctaggcttgcatcacccttgacgccagataacaat
caacctgctctctccactgaccagtgtgatcttcataaatccatacttaagtctcaactg
caatctgagctttctggtcaatctccactagaatgtggcatatatgtgcctccgttcaga
agagagagaaatagtttgagcatggtttcaagtagagtgaaaattctgagttacaatgtg
tggttcggagatttggagatacataataggatggaggctcttggtgaacttattcaattg
cattctcctgatgtcatttgtttccaggaggttacacttgatatgtatgacatttttaag
gtatcaagctggtggaacacatataattgctcagtttcacatcaaatggccagtacaaga
agatatttctgcatgcagttgagcaaacttccagtaaaatccttcagctgcaaaccgttc
agcaattctacaatgctgagagaactgtgcatggctgagattgaagtgagggggaaattg
ttgattgtagccacaagccatcttgagagcccctgccctgcccctcctaaatgggatcaa
atgcacagtgaggaacgtatagctcaggcaaaggaggctgttaaccttcttaagaaattt
ccaaatgtggtcttttgtggtgacatgaattgggatgaaaatttggatggaaagtttcct
ttatctgatggatggattgatgcctgggcagatttgaggcccggtgaaaatggatggaca
tatgatactgtgtctaatccaatgctctcttctaaccggcctttgcaaaagcggccagat
agatttatttgcaatctgtgtgatttcaaattaagtgcaatcgacatgataggaatggag
gctatacctggagtgtcatataagaaggggaagaaggtaagaaaagggttccaaaagtcg
atgcttcctgtattgcctagtggtcattatggcttgctcttaggggttaatgtccagtaa
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