Qipengyuania xiapuensis: K3162_00010
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Entry
K3162_00010 CDS
T10368
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
qxi Qipengyuania xiapuensis
Pathway
qxi03410
Base excision repair
qxi03430
Mismatch repair
qxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3162_00010 (recJ)
03430 Mismatch repair
K3162_00010 (recJ)
03440 Homologous recombination
K3162_00010 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qxi03400
]
K3162_00010 (recJ)
DNA repair and recombination proteins [BR:
qxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K3162_00010 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K3162_00010 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K3162_00010 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QZD92477
UniProt:
A0ABX8ZTZ3
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Position
complement(158..1942)
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AA seq
594 aa
AA seq
DB search
MATSALPHVYGVSQSMTGRAWRWRGGNMDLGQGHFGDGEGIVRQLLLARGVAPEDVQRHL
SPTLREFLPDPSEFNDMDAAADRIAQAILTGEKITVYGDYDVDGATSSALLIRLLRELGV
EAEYYIPDRLLEGYGPSGEALVKLGETGSSLIVTVDCGAMAHEALAMASDAGIDVIVVDH
HKCSPELPRAAALVNPNRLDENDLAAAHGHLAAVGVAFLLGIALVRTLRAQDYFASRNEP
NLMALLDLVALGTVADVAALHGLNRAFVAQGLKVMGRRDNIGMAALIDASRLKRAPICSD
LGFALGPRINAGGRVGESTLGVRLLTTEDPEEAASIAAQLSALNEERRAIEAEVQQAAED
QLAAQHNRAVHVVAARGWHPGVIGIVAGRIKEKTGKPSLVIALDEDGEGKGSGRSIPGVD
LGAAIIRAREEGLLVKGGGHAMAAGLTVAEDRLDDFSDWLDTHLEGAVARADANREMLLD
LAVAPGGLTPDLVNALDGGGPYGVGWPGPRVAVGPVRLVKCDIVGTDHVRIIASGDDGKS
FKGIAFRAADSDMGQALLHSSRGRRLWLAGRVKIDDWGSRPQAELHLEDAAFAD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctccgcccttccccacgtctatggtgtttcgcaatcgatgaccggccgcgca
tggcgctggcgcggcggcaatatggacttgggacaaggacatttcggcgatggcgaaggc
atcgtgcggcaattgctgctcgcacgcggcgtagcgccggaggacgtccagcgccatctc
tcgccaacattgcgcgaattcctgcccgacccttccgaattcaacgatatggacgccgcc
gccgaccggatagcacaggccatcctgaccggcgagaagatcaccgtctacggcgactac
gacgtcgacggcgccaccagctccgcgctccttatccgcttgctacgggaactcggcgtc
gaggcggaatactacattcccgaccggctgctcgaggggtacggtccttccggcgaagcg
ctggtcaaactcggagagactggctccagcctgatcgtgaccgtcgattgcggcgccatg
gcccacgaagccctggccatggcaagcgacgccggcatcgacgtgatcgttgtcgaccat
cacaagtgctcgccggagctccctcgcgccgccgcactggtcaatccgaaccgcctcgac
gagaatgatctcgcggccgctcacgggcatctggccgcagtgggtgtcgccttcctgctg
ggcatagccttggtgaggaccctgcgagcgcaggactacttcgcctcgcgcaacgagccc
aacctcatggccctgctcgacctggtggcgctcggcacggttgccgacgtggctgccctg
catggcctcaaccgcgcattcgtcgcgcaaggtctcaaggtcatgggccggcgcgacaac
atcggcatggcagcgctcatcgacgcgagccggctgaagcgcgcgccgatctgctcggat
ctcggcttcgcgctcggaccccgcatcaacgccggcgggcgtgtcggcgaatcgacgctg
ggtgtcaggctgctcacgaccgaggatccggaagaagctgcttccatcgcggcacagctc
tccgcgctcaacgaagaacgccgtgcgatcgaggccgaggtccagcaggcggccgaggac
cagctggcggcacagcacaaccgcgctgtccatgtcgtcgcggcgcgcggctggcatccg
ggcgtgatcggtatcgtcgcaggacgcatcaaggaaaagacgggcaagccctcgctcgtc
atcgccctcgacgaggatggtgaaggcaagggatcgggccggtccatcccgggcgtcgat
ctcggcgccgcgatcatccgtgcgcgcgaagagggactgctggtcaagggcggcgggcac
gcgatggcagccggtctgaccgttgccgaggaccgcctcgatgatttttccgactggctc
gacacgcatctggaaggcgcagtcgcgcgggcagatgcgaaccgcgagatgcttctcgat
cttgcggtagccccgggtgggcttacgcccgacctcgtcaacgccttggacggcggcggc
ccctatggcgtcggttggcccggcccgcgtgtggcggtggggccggtacgcctcgtcaaa
tgcgatatcgtcggcaccgaccacgtgcgcatcattgcgagcggagacgacggcaagagc
ttcaagggtatcgctttcagggcagccgacagcgacatgggacaagcgctgctccattcc
tctcgcgggcgcaggctgtggctcgcgggccgcgtcaagatcgacgactggggcagccgt
ccgcaggccgaactccatctggaagacgctgctttcgccgattga
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