Qipengyuania xiapuensis: K3162_02620
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Entry
K3162_02620 CDS
T10368
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
qxi Qipengyuania xiapuensis
Pathway
qxi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3162_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qxi03021
]
K3162_02620
03400 DNA repair and recombination proteins [BR:
qxi03400
]
K3162_02620
Enzymes [BR:
qxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3162_02620
Transcription machinery [BR:
qxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3162_02620
DNA repair and recombination proteins [BR:
qxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3162_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
Phage_tube_2
IDH
Motif
Other DBs
NCBI-ProteinID:
QZD92950
LinkDB
All DBs
Position
complement(527796..528851)
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNIKNWQELKKPNTLDIKDGGDKDRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGMKRLQLSATGPGEVKAGDI
AVSGDIEVMNKDLVICHLDEGATLNMELTADTGKGYRPAVMNRPADAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTIETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPSSAMIGQAAEPQESDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacatcaagaactggcaggaactcaagaaacccaacaccctcgacatcaag
gacggtggcgacaaggaccgcaaggcgaccttcgttgcagaaccgctcgagcgcggcttc
ggcctgacgctcggtaacgcgctgcgtcgcgttctcctgtcctcgctgcagggtgcagcc
atcacctcgatcaagatcgagaacgtgctgcatgaattctcctcgctcgccggcgtgcgc
gaggacgtcaccgacatcgtcctgaacgtgaagcagatcgcgctcaagatggaaggtgaa
ggcatgaagcgcctccagctctcggccaccggcccgggcgaagtgaaggctggcgacatc
gccgtttcgggcgacatcgaggtcatgaacaaggacctcgtgatctgtcacctcgacgaa
ggcgccacgctcaacatggagctgaccgccgacaccggtaagggctaccgcccggcagtg
atgaaccgtccggccgacgcgccgattggcctcatcccggtcgacagcctgtactcgccg
gttcgccaggtgagctacaaggtcgagaacgcccgcgttggccaggaactggactacgac
aagctctcgctgaccatcgaaaccgacggcactgtcaccccggaagacgccgtggcctat
gctgcgcgcatcctccaggaccagctgacgctgttcgtccacttcgaagacggcatcccg
cagcccagctcggccatgatcggccaggctgcagagccgcaggaaagcgacaccaaccag
ctcaaccgttacctcctcaagaaggtcgacgagctggaactgtcggtccgttcggcaaac
tgcctcaagaacgacaacatcatctacatcggcgacctggtccagaagaccgaggccgag
atgctccgtacgccgaacttcggccgcaagtcattgaacgagatcaaggaagtgctctcg
tcgatgggtctgcgcctcggcatggacatccctggctggccgccggagaacatcgaagaa
atggccaagaagctcgaacaggaacttctcggctaa
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