Qipengyuania xiapuensis: K3162_03220
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Entry
K3162_03220 CDS
T10368
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qxi Qipengyuania xiapuensis
Pathway
qxi00040
Pentose and glucuronate interconversions
qxi01100
Metabolic pathways
qxi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K3162_03220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K3162_03220
Enzymes [BR:
qxi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K3162_03220
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QZD93746
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Position
complement(632413..633729)
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AA seq
438 aa
AA seq
DB search
MLHACSNGPAGDAEEQFRFEGTLPVVETSANAFPGALGFGAISKGGAEGEIIQVTTLADD
GPGSYRACVTADMPRVCVFRVEGVIRFTGRPPIISSPYLTIAGQTAPGDGITLAHSGAPH
GRTPLVIKGTHDVVVRNIRVRLDRPGGAREAEDGITIENSRRVMIDHVSVSGARDENING
FADNDAVSITNSIFSYGVPRHDKCALLGSDPVGPQNFSFISNLCAHNGDRNPDVNFPPGS
CIEVLNNVFYNAQSEFAEVWEGAGGTPVSLIGNSFVAGPDTRRGTIGIANERIASTGPAS
VFLHDNAFLGEFTQVAPATRERLVGDPPCPLTTEPRSSHEAMLDVLANAGAMPRDPIDRQ
VVGEVHARGGRIGRWPKMLAQGRGERPYPDEDLDGMDDVWELAHGADTGVSDPWGDADGD
GISNLSAFLAHRDAELAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgcgtgttcgaacggtcctgcgggagatgccgaggagcagtttagattcgaa
ggcaccctgccggtcgtggagacttcggcgaacgcttttcctggcgcgcttggtttcggg
gcaatctcgaaaggaggggcggaaggcgagatcatccaggtgactacgctggccgatgac
ggtccgggttcctaccgggcctgtgtaacagcggatatgccgcgtgtttgcgtcttccga
gtggaaggcgtgatccggttcaccggaagaccacccatcatatcgtcgccctatctcacc
attgcgggacagaccgcgcctggcgacgggatcaccctggcccactcgggcgcgccgcac
gggcgcacaccgctcgtcatcaagggcacccatgacgtcgtcgtgcgcaacatacgcgtg
cggctcgaccggccgggcggtgcgcgcgaggccgaggacggcattaccatcgagaactcc
cggcgggttatgatcgaccatgtgagcgtcagcggtgcgcgcgacgagaacatcaacggt
ttcgccgacaacgacgcggtttccatcaccaattcgatcttttcctatggcgttccgagg
catgacaaatgcgcgctgctcggcagcgacccggtcggcccccagaactttagcttcatc
tcgaacctttgcgcccacaacggtgaccggaatcccgacgtgaacttcccgcccggttcc
tgcatcgaagtgctcaacaacgtgttctacaatgcccagtcggaattcgccgaagtgtgg
gaaggggcgggcggcaccccggtctcgctgatcggcaacagcttcgttgcgggacccgat
acgcggcgcgggaccatcggcatcgcgaacgagcgcattgcctctacggggccggcaagc
gtcttcctccacgacaatgcgtttctcggcgagttcacacaggtcgcgccggccacgcgc
gaaaggctggtcggcgatccgccctgtccgctgaccacggagccgcgctcctcccatgag
gcgatgctggacgttcttgcgaatgcaggtgccatgccgcgcgaccccatcgaccggcaa
gtcgtcggtgaagttcacgcacgcggtggcaggatcgggagatggcccaagatgctcgcg
cagggacgcggcgaaaggccttatccggacgaagatctcgacgggatggacgatgtctgg
gagttggcacatggcgccgacacgggagtgtcggacccttggggcgacgccgatggcgac
ggtatctcgaacctgtcggcgtttcttgcccaccgcgatgcggagctggcacgatga
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