Qipengyuania xiapuensis: K3162_08410
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Entry
K3162_08410 CDS
T10368
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
qxi Qipengyuania xiapuensis
Pathway
qxi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3162_08410 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qxi03021
]
K3162_08410 (rho)
03019 Messenger RNA biogenesis [BR:
qxi03019
]
K3162_08410 (rho)
Transcription machinery [BR:
qxi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K3162_08410 (rho)
Messenger RNA biogenesis [BR:
qxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K3162_08410 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
Spore_III_AA
NACHT
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
GpA_ATPase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QZD91589
UniProt:
A0ABX8ZUV9
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All DBs
Position
1643578..1644843
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AA seq
421 aa
AA seq
DB search
MHLKDLKAKAPAELVAMAEELGVEAAGTMRRQDLMFCILRELADDEEYDEEIMGIGTIEV
LQDGFGFLRSPEANYLAGPDDIYVSPNQIRKWGLRTGDTVEGQIRAPKEGERYFALTGLT
SVNYEDPANVRTRTNFDNLTPLYPEEKLNLDTLDPTVKDKSARVIDIISPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPAN
RHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
LDVGKSGTRKEELLVEKDKLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaagacttgaaagcaaaagcacccgcagagctcgtggccatggccgaagag
ctgggtgtcgaggccgcgggcaccatgcgccgccaggacctcatgttctgcatcctgcgc
gaactcgcggacgatgaagaatacgacgaagagatcatgggcatcggcacgatcgaggtg
ctgcaggacggcttcggcttcctgcgcagccccgaggcgaactacctcgccggcccggac
gatatctacgtctcgcccaaccagatccgcaaatggggcctgcgcacgggcgacaccgtc
gaaggccagatccgcgcgcccaaggaaggcgagcgctatttcgcgctgaccggcctgacc
tcggtcaactacgaggatccggcgaacgtgcgcacgcgcaccaatttcgacaacctcacg
ccgctctatccggaagagaagctcaacctcgacacgctcgatccgaccgtcaaggacaag
tcggcgcgcgtgatcgacatcatctcgccgcagggcaagggccagcgcgcgctgatcgtc
gcgccgccgcgtaccggtaagacggtcctgctgcagaacatcgccaaggcgatcaccgac
aaccacccggaagtcttcctcctggtcctgctcgtcgacgagcgtccggaagaagtcacc
gacatgcagcgcagcgtgaagggcgaggtcatctcctccaccttcgacgagcctgccaac
cgccacgtccaggttgccgaaatggtgatcgagaaggccaagcgcctcgtcgagcacaag
aaggatgtcgtcatcctgctcgactcgatcacgcgtctcggccgcgcctacaacaccgtc
gtgcccagctcgggcaaggtgctgaccggcggtgtcgatgcgaacgcactgcagcgcccg
aagcgtttcttcggtgccgcgcgtaacatcgaggaaggcggttcgctttcgatcatcgcc
accgcgctgatcgacaccggcagccgcatggacgaggtcatcttcgaagagttcaagggc
acgggtaacagcgaaatcgtcctcgaccgcaaggtcgccgacaagcgcatcttcccggca
ctcgacgtcggcaagtccggcacccgcaaggaagagcttctggtcgagaaggacaagctc
tccaagatgtgggtcctgcgccgtatcctcatgcagatgggcacggtcgacgcgatggaa
ttcctcctcgacaagatgaaggattccaagaccaacgaagacttcttcgccaccatgaac
cagtaa
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