Qipengyuania xiapuensis: K3162_09565
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Entry
K3162_09565 CDS
T10368
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qxi Qipengyuania xiapuensis
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K3162_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qxi03019
]
K3162_09565
03009 Ribosome biogenesis [BR:
qxi03009
]
K3162_09565
04131 Membrane trafficking [BR:
qxi04131
]
K3162_09565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qxi04147
]
K3162_09565
Messenger RNA biogenesis [BR:
qxi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K3162_09565
Ribosome biogenesis [BR:
qxi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K3162_09565
Membrane trafficking [BR:
qxi04131
]
SNARE
SNARE associated proteins
Others
K3162_09565
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K3162_09565
Exosome [BR:
qxi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K3162_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_22
AAA_2
AAA_33
AAA_14
TIP49
IstB_IS21
AAA_7
RNA_helicase
nSTAND3
NPHP3_N
AAA_18
AAA_28
AAA_lid_PRS2_C
Mg_chelatase
AAA_3
AAA_17
NACHT
AAA_24
Parvo_NS1
AAA_11
Sigma54_activat
AAA_19
ABC_tran
Zeta_toxin
DUF815
TsaE
AAA_30
NB-ARC
Vps4_C
SLFN-g3_helicase
AAA_25
ResIII
PhoH
ATPase
Molydop_binding
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QZD91800
LinkDB
All DBs
Position
1865097..1867421
Genome browser
AA seq
774 aa
AA seq
DB search
MADADTATAADEKTVRLQVAAARQEESGQGIARMPRSAFQALGITEGDTVEITGKRATVA
IAMPAYDEDQSLDVIRLDGLQRGNAEVGSGEHVQVVAVESRPATRVIFAPAQREMRLQGP
AQALKRNFFRKPLTAGDLVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLSVVSTTPKGI
VHIDEDTEVELRAEFEAPRDARAVVNYDDVGGIDDTIQALREMVELPLRYPELFTRLGVD
PPKGVLLHGPPGTGKTRLAQAVANESDANFFTINGPEIMGSGYGESEKRLREVFEEAGKS
SPAIIFIDEIDSIAPKRDRVPGEAEKRLVAQLLTLMDGLEARSNLVVIAATNRPDAIDEA
LRRPGRFDREIVIGVPDEKGRREILGIHTRGMPLGDKVDLAELAKATYGFVGADIAALSR
EAAIDAVRRIMPKIDLDERTIPPEVLDELCVTREDFLSALKRIQPSAMREVMVQMPNVGW
SDIGGVGDAIEKLKEGIELPMKNPDAFHRLGIRPAKGFLLYGPPGTGKTLLAKAVAKEAK
ANFISMKSSDLLSKWYGESEQQIARMFKRARAVAPCVIFIDEIDSLVPARGSGQGEPQVT
GRVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPDKPGRKQIL
GIHTANMPLADDVDLGAVAEKTERFTGADLEDVVRRAGLNALQRAGGDVQEVTAEDFTEA
LKDSRATVTTRMEAEYRKMRGELKKRAAEVQPIGFIHEGMLESTRDSKHSNEKG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctgacactgcgacggcggcagatgaaaaaacggttcggctgcaggtcgca
gcagcgaggcaggaagagagcgggcagggcatcgcccgcatgccgcgttccgcattccag
gcgctcggtataaccgagggcgacactgtcgagattaccggcaagcgcgccacggtcgcc
atagccatgccggcctatgacgaggaccagtcactcgacgtcattcgcctcgacggtctc
cagcgcggcaatgccgaagtcggttcgggagagcatgtccaggtggtcgcagtcgaatcg
cgaccggcgacccgcgtgatcttcgctccggcgcagcgcgagatgcgattgcaggggccg
gcccaggcgctgaagcgcaatttcttccgcaagccgctgaccgcaggcgacctcgtcgcg
acgacggggcagcagccggtgcagaacatgccgcccgaagtgcgccggatgttcaacgcg
cccgcgtatgcactcacccagatccggctttcggtcgtctcgaccacgcccaagggcatc
gtccatatcgacgaggacaccgaagtcgaattgcgcgccgaattcgaagcgccgcgcgat
gcgcgcgctgtcgtcaactacgatgatgtcggcggtatcgacgacaccatccaggcactg
cgcgagatggtcgaactgccgctccgctatcccgagctcttcacccgtctcggtgtggac
ccgcccaagggcgtgctgcttcacggcccgccgggcaccggcaagacgcgcctcgcacag
gccgtcgcgaacgaaagcgatgcgaacttcttcaccatcaacgggccggaaatcatgggc
tcgggatatggcgaaagcgagaagcgcctgcgcgaagtcttcgaggaggcgggcaagtct
tcgcccgccatcatcttcatcgacgagatcgactcgattgcacccaagcgcgaccgggtt
ccgggtgaagccgaaaagcggctcgtcgcccagctgttgacgctgatggacggactggag
gcgcgttcgaaccttgtcgtgatcgcggccaccaaccgacccgatgcgatcgacgaagcg
ctgcgccgtccgggccgcttcgaccgcgagatcgtgatcggcgttcccgacgagaaaggc
cgccgcgaaatcctcggcatccatacccgcggcatgccgctgggtgacaaggtcgacctc
gccgaactggcgaaggccacctacggcttcgtcggcgcggatatcgccgcgctgtcgcgc
gaggccgcaatcgacgccgtgcgccgtatcatgccgaagatcgacctcgacgagcggacc
attccgcccgaagtgctcgacgaactttgcgtgacgcgcgaagacttcctttccgcactc
aagcgcatccagccttcggccatgcgcgaagtcatggtgcagatgcccaatgtcggctgg
tccgatatcggcggtgtcggagatgctatcgagaagctgaaggaaggcatcgagctgccg
atgaagaaccccgatgccttccacaggctcgggatcaggccggccaagggtttcctgctc
tacggcccgccgggcaccggcaagaccctgctcgccaaagcggtagcaaaggaagccaag
gccaatttcatctcgatgaaatcgagcgacctcctgtcgaaatggtacggtgagagcgag
cagcagattgcccgcatgttcaagcgcgcccgcgccgtggcgccctgcgtcatcttcatc
gacgagatcgacagcctcgtacctgcccgtggcagcgggcagggcgaaccgcaagtgaca
gggcgcgtggtcaacaccattcttgccgagatggacgggctcgaggagttgcagtcggtg
gtggtcatcggtgccacgaaccgcccaacgctggtcgatcccgcgctactgaggccgggt
cgcttcgacgagctggtatatgtcggcacgcccgacaagccggggcgcaagcagatcctc
ggtattcatacggcgaacatgccgctcgcggacgacgtcgatctcggcgctgtcgccgag
aagaccgagcgcttcaccggcgccgacctcgaagacgtggttcgccgtgcgggtctgaac
gccttgcagcgcgcaggcggggacgtgcaggaagttaccgctgaggacttcaccgaagcg
ctcaaggacagccgcgccactgtcaccacgcggatggaagccgaatatcgcaagatgcga
ggcgagctgaagaagcgtgcggccgaggtccagccgattggcttcattcacgagggcatg
ctggagagcacccgcgacagcaagcactcgaacgaaaagggctag
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