Qipengyuania xiapuensis: K3162_12720
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Entry
K3162_12720 CDS
T10368
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qxi Qipengyuania xiapuensis
Brite
KEGG Orthology (KO) [BR:
qxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qxi03032
]
K3162_12720 (topA)
03400 DNA repair and recombination proteins [BR:
qxi03400
]
K3162_12720 (topA)
Enzymes [BR:
qxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K3162_12720 (topA)
DNA replication proteins [BR:
qxi03032
]
Prokaryotic type
DNA Topoisomerases
K3162_12720 (topA)
DNA repair and recombination proteins [BR:
qxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3162_12720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QZD92379
LinkDB
All DBs
Position
2533524..2536070
Genome browser
AA seq
848 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQK
RFKEISDAAKKADRLVLATDPDREGEAISWHVRELLQKRKALPEKVDRVTFNAITKQAVT
DAMKAPRELDQDLIDAYLARRALDYLYGFTLSPVLWRRLPGAKSAGRVQSVALRLIVDRE
IEIEHFKADEYWSVLAKLEQDGTEFDARLVKFDGKKLQKLTLGDEGSAKAAKKAVEDSRF
TVEEIETKPLKRSPAPPFTTSTLQQEAARKLGFSASHTMRLAQSLYEAGAITYMRTDGVQ
MDGSAIDACRKAIANRYDAYYLPDKPRFYSTKAKNAQEAHEAIRPTDFTRDRVSSGDEGK
LYDLIFKRAMASQMASANLERTTITLRDGTGMHELRATGQVVKFPGYFAVYQEGRDEPSE
DDEDGLLPVVNKGDSPLKKTVEANQHFTQPPPRFSEASLVKKLEELGIGRPSTYASTLQT
LRDRNYVRMEKNRFFAEESGRLLTAFLERFFERYVSFDFTAGMEDELDTVSDGREEWKKL
LAEFWKDFKPKTEEIMEKKPSEVTEVLDDFLSDYLFPKRADGKDPRHCPLCETEGREGGR
LALRGGRFGAFVACANYPECKFTRQFAKPGSDGDDGANDGVMGEDPDTGLPVERKSGRFG
PYVQLGEGKDAKRASIPKDLDDFDLEWALKLLSLPRIVGAHPETGKEIEAAIGRYGPYLR
HDGKYGKLQNTREVFEVGMNRAVDILAQAANRKGGGRGKAEPIKTLGEHPTSGGEMKVMP
GRYGPYVTDGTTNATIPKDMKPEDVTEAQAIELIDARAAKGPAKKKRKAPAKKKAAPKKK
AAAKKKAD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggttattgttgagtcgcccgcgaaggcgaagaccattgagaaatacctcggc
aaggacttcaaggttctcgccagctacggccatgtccgcgacctgccgcccaaggacggc
agcgtgcgcccggacgaggatttcgcgatggattgggagctctatcgcgacaagcagaag
cgcttcaaggagatcagcgacgcggccaagaaggccgaccggctggtcctcgcgaccgac
cctgatcgcgaaggcgaagcgatcagctggcacgtccgcgagctgctgcagaagcgcaag
gcgctgcccgagaaggtcgaccgcgtcactttcaacgcgattaccaaacaggccgtcacc
gatgcgatgaaggctccgcgcgagctcgaccaggatttgatcgacgcctacctcgcgcgc
cgcgcgctcgactatctctacggattcaccctgtcgccggtcctttggcgccgactgccg
ggtgcgaagagcgcgggccgcgtgcagtcggtcgcgctgcgcctgatcgttgatcgcgag
atcgagatcgagcacttcaaggcggacgaatactggtcggtcctcgccaagctcgagcag
gacggaacagaattcgacgcgcggctggtcaagttcgacggcaagaagctccagaagctg
acgctgggtgacgagggcagcgccaaggccgccaagaaagcggttgaggattcccgtttc
acggtcgaggaaatcgagaccaagccgctgaagcgcagccccgcgccgccgttcacgacc
tcgacgctgcagcaggaggctgcgcgcaagctcggcttctccgccagccacacgatgcgt
cttgcccagtcgctctacgaggctggcgcgatcacctatatgcgtaccgacggcgtacag
atggacggcagcgcgatcgacgcttgccgcaaggccatcgcgaaccgctatgacgcctat
tacctgcccgacaagccgcggttctattcgaccaaggccaagaacgcgcaggaggcccac
gaggcgatccgcccgaccgatttcacccgcgaccgcgtgagttcgggcgatgagggcaag
ctctacgacctgattttcaagcgcgcgatggcgagccagatggcctcggccaatctcgag
cgcaccacgatcacgctgcgggacggcaccggcatgcacgagctgcgcgcgaccggccag
gtggtgaagttcccgggctatttcgccgtctaccaggaaggccgcgacgagccttcggaa
gacgatgaggacggtctgctgccggtcgtcaacaagggcgacagcccgctcaagaagacg
gtcgaggcgaaccagcacttcacccagccgccgccgcgtttcagcgaagcgagcctcgtt
aagaagctcgaagagctgggcatcggtcgcccgtcgacctatgcctcgacgctccagacg
ctgcgcgatcgcaattacgttcgcatggagaaaaaccgtttctttgcagaggaatcgggg
cgtctcctcacggcatttctcgaacgctttttcgagcgttacgtgtccttcgatttcacc
gccgggatggaggatgagctcgatacggtgtcggacgggcgcgaggagtggaagaagctg
ctcgccgagttctggaaggacttcaaacccaagaccgaagagatcatggagaagaagccc
tcggaagtgaccgaggtgctggacgacttcctttccgactacctcttccccaaacgcgcc
gacggcaaggacccgcgtcattgcccgctgtgcgagaccgagggccgcgaaggcggacgc
ttggcactgcgcggtggccgcttcggcgccttcgtcgcttgcgccaactatcccgagtgt
aagttcactcgccaattcgccaagccaggcagcgacggtgacgacggcgctaatgacggc
gtgatgggcgaggatccggacacgggtctgccggtcgagcgcaagagcggccgcttcggc
ccctatgtccagctgggcgagggcaaggacgccaagcgcgcgagcatccccaaggacctc
gacgatttcgacctcgaatgggcgctgaagttgcttagcctgccgcgcattgtcggtgcg
catccggaaaccggcaaggagatcgaggccgccatcgggcgttatggtccctacctgcgc
cacgacggcaaatacgggaagctgcaaaacacccgcgaagtgtttgaggtcggcatgaac
cgcgctgtcgacatcctcgctcaggccgccaatcgcaagggcggcgggcgcggcaaggcg
gaaccgatcaagacgctgggtgagcatccgaccagcggcggcgagatgaaggtgatgccg
ggtcgctacggcccctatgtcaccgacggcaccaccaatgccacgatccccaaggacatg
aagcccgaggacgtgaccgaggcgcaggcgatcgagctgatcgatgcgcgtgctgccaag
ggaccggcgaagaagaagcgcaaggccccggccaagaagaaggctgcaccgaagaagaag
gcggcggccaagaagaaggccgactga
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