Rahnella aquatilis HX2: Q7S_01835
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Entry
Q7S_01835 CDS
T01850
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q7S_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raa03021
]
Q7S_01835
03400 DNA repair and recombination proteins [BR:
raa03400
]
Q7S_01835
Enzymes [BR:
raa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q7S_01835
Transcription machinery [BR:
raa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q7S_01835
DNA repair and recombination proteins [BR:
raa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q7S_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AFE56632
LinkDB
All DBs
Position
394119..395108
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagcctttagaacgtggctttggccatactttaggc
aacgcactgcgccgtattctgctttcatccatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaagggaaagatgaagttattctt
accctgaataagtctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccgcaacatgtcatctgccacctgaccgatgagaacgctgcaatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccaattggtcgtctgttagtagacgcatgctacagccctgta
gagcgaattgcctacaatgttgaagcagcgcgtgtagaacagcgtactgatttggacaag
ctggttatcgaaatggaaaccaacggtacgatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattcttgctgaacaacttgaagctttcgttgatttacgtgatgtacgtcaaccg
gaagtcaaagaagagaagccggaattcgatccaatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagcaatccactacatcggtgat
ctggtacagcgtaccgaggttgagttacttaaaacacctaacctgggtaaaaaatctctt
actgagatcaaagacgtacttgcgtcccgtggtttgtctctgggcatgcgcctggaaaac
tggccaccagcaagtattgctgacgagtaa
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