Rahnella aquatilis HX2: Q7S_02080
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Entry
Q7S_02080 CDS
T01850
Name
(GenBank) putative mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
raa
Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
raa02000
]
Q7S_02080
Transporters [BR:
raa02000
]
Other transporters
Pores ion channels [TC:
1
]
Q7S_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AFE56681
LinkDB
All DBs
Position
complement(447351..450719)
Genome browser
AA seq
1122 aa
AA seq
DB search
MRLIPALLMSLLLSLPLMAGAAPTEDQLKQELKQAEANKEMANQTQVVEALQSALNWLNE
ASVSAGRTAEYQKVIDDFPKLTQALRQELRNQPDKPPALDNSISAAQLEQQILQVSSQQL
EETRQLRQEQDRSRDISDSLSLIPQQQSEARNALSDIDQRIQAATAAATSSPLAQAQLSA
LQAESAARKAKVDELELAQLSANNRQELSRMRTDLYKKRADFLDQQLQVLRNTLNNQRQQ
EAEQALEKTELLAEQSGELPHSISQQLQANRELSLALNQQAQRMDLISSQQRQAAAQTQQ
VRQAINTIREQAQWLGASNLLGETLRAQVARLPDMPKPQQLDRDMGQLRVQRLHYEDLLD
KQAIYRQARQDDGKPLTTDQQKILDAQLRTQRDLLNSLLSGCDTQILELTKLKVANSQLV
EALNDVHDAAHRYLFWVADVSAIGISYPVQVAHDLKRLVSLDSLSQLGGASMMMVTSKET
LLPLFGALILVIISISSRKHYYAFLERANSKVGKVTQDHFSLTLRTVFWSILVAMPLPVL
WAALGFGLQSAWPYPIAVAIGDGVTATLPILWAFMVSAALAHPQGLFVAHFGWPQRAVSR
ALRYYALSIWVLVPLIMALITFDNLNDREFSNTLGRLCFVIQCLVVALVTNSLKRAGIPL
YHDKKGNSENIINKTLWWMLLGAPIVAALASLMGYLATSQALLARLETSVAIWFVLLVIY
HIIRRWMLIQRRRIAFERAKQRRAEMLNQRARGEEDGHQISTSNEGTVEIEEPVVDLDAI
SAQSLRLVRSLLTLIALISVIFLWSEIHSAFSFLENIHLWQVASTVQGVESMQPITLGSV
LIAILVLIITTQLVRNLPALLELALLQHLDLTPGTGYAVLTVTKYVLLLIGGLTGFSLIG
IEWAKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRNLTGSITRINT
RATTIADWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSEANSEEVTEILLNAA
HRCSLVLDMPAPEAYLVDLQQGIQIFELRMHAAEMAHRMPLRHEIHQLILAGFREHGITL
PFPPFQVRMETLHRAQNGNNATFTSSSGSGRSGNSSRSPGDL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatccccgccctgctgatgagtttactgctgtccctgccattgatggcgggt
gcagccccgactgaagatcagctcaaacaggagctgaaacaggcggaagccaacaaagaa
atggccaatcagacgcaggtggttgaggcgctgcaaagcgcactcaactggctgaatgaa
gccagtgtttcagccgggcgcacggcggaatatcaaaaggtcattgatgactttccaaaa
ctgacgcaggccctgcgccaggaattgcgaaatcagcctgacaagccacccgcgctggat
aacagcatctcagccgctcagctcgagcagcaaattctgcaagtcagcagccagcaactg
gaagaaacccgccagttacgtcaggagcaggatcgttcccgcgacatcagcgactcacta
agtctgatcccgcaacagcaatccgaagcccgcaacgcgctgagcgacatcgatcagcgc
atacaggcggcgacagcggcggccacctcctcacccctggcgcaggcgcaactcagcgcg
cttcaggccgaatccgcagcgcgcaaagcgaaggtggatgaactggaactggctcagctt
tctgccaataaccggcaggaattgtcgcggatgcgcaccgatctctacaaaaagcgcgcc
gattttcttgatcagcaattacaggttttacgcaacacgctgaataatcaacgtcagcag
gaagccgaacaggcgctggaaaaaaccgagctgctggccgaacagagtggcgagttgcca
cactcgatcagtcagcagttacaggcaaaccgcgagttgtcgctggcgctgaatcagcag
gcgcagcggatggacctcatttcctctcaacaacgtcaggccgctgcacagactcagcag
gtacgtcaggcgattaataccattcgcgaacaggcgcagtggcttggcgcgtctaattta
cttggcgaaaccctgagggcgcaggttgcgcgtctgccggatatgccaaaaccgcaacag
cttgaccgcgatatgggccagttgcgcgttcagcgtctgcactatgaagatttgctggat
aagcaggctatttaccgtcaggcgcggcaggacgatggcaaaccgctcaccacagatcag
caaaaaattctggatgcgcagctgcggacgcaacgtgatttgctcaattccctgctctcg
ggttgcgatacccaaattcttgaactgaccaagctgaaagtggcaaacagccaactggtg
gaggcgctgaatgacgtacatgacgccgcccaccgttatctgttctgggtggcagacgtc
agcgccatcggcatttcttacccggtgcaggtcgcgcatgacctgaaacggctggtctcg
ctggattcgctcagccagcttggcggtgcgtcgatgatgatggtcaccagcaaagaaaca
ctgttgccgctgtttggcgccctgattctggtgattatcagcatcagttcccgcaagcac
tattatgcatttctggaacgtgccaacagtaaagtcggcaaagtcacgcaggatcatttc
tcgctgaccctgcgtaccgtgttctggtcaattctggtggcgatgccgttacctgtgctg
tgggccgcgctgggattcgggctgcaaagtgcctggccgtatccgattgcggtggcgatc
ggcgatggcgtcaccgcgacgttgccaatcctgtgggcgtttatggtcagtgccgcgctg
gcacatcctcagggattgtttgtggcacacttcggctggccgcagcgtgcggtgtcaagg
gcactgcgctattacgcgctgtcgatctgggtgctggtgccgctcattatggcgctgatt
accttcgataatctcaacgatcgcgagttctctaatacgctgggacgtctgtgcttcgtg
attcagtgtctggtggtcgcactggtcaccaatagtctgaaacgcgcgggcattccgctg
tatcacgataaaaaaggcaacagcgaaaacatcattaacaagacgctgtggtggatgctg
ctgggcgcaccgattgtcgctgcgctggcttcactgatgggctacctcgcgacctcacag
gcgctgctggcccgcctggaaacctcggtcgccatctggttcgtgttgctggtgatttat
cacattatccgccgctggatgctgattcagcgacgtcgtatcgccttcgaacgcgccaag
cagcgccgtgcggaaatgctgaatcaacgcgcccgtggtgaggaagatggccatcagatc
agcaccagcaatgaaggcacggtcgagattgaggaaccggtggtggatctggatgccatc
tctgcccagtcgctgcggctggtgcgttctctgctgacgttgatcgcgctgatctcggtg
atcttcctgtggtctgaaatccactcggccttctctttcctggaaaatattcatctctgg
caggttgcgtctacggttcagggggtggaaagcatgcagccgatcaccctcggatcggtg
ctgatcgccattctggtgctgattatcaccacgcaactggtgcgtaatctgcccgcattg
ctggaactggcgctactgcaacatctggatctgacgccgggtaccggctatgccgtactg
accgtcaccaaatacgtattgctgctgattggcggcctgaccggtttctcgctgatcggg
atcgagtgggcaaaactgcaatggctggtggcggcactcggtgtcggtctcggcttcggt
ttgcaggagatcttcgctaactttatttccggcctgattatcctgtttgaaaaaccgatc
cgtatcggcgataccgtaacgatccgcaacctgaccggcagtatcaccaggatcaacacc
cgtgccacgacgatcgctgactgggaccgcaaggagattatcgtgccgaacaaggccttt
atcaccgagcagttcatcaactggtcgctgtcggattccgtcacgcgtgtggtgctaacc
gtgcctgcaccgtcggaggccaacagtgaagaagtgacagaaattctgctcaacgctgcg
catcgctgttcgctggtgctggatatgcctgcgccggaagcctatctggtggatctccag
caggggattcagattttcgagctgcgtatgcatgccgctgaaatggcgcaccgtatgccg
cttcgccatgaaattcaccaactgatcctggctggattccgcgagcacggcattacactg
ccattcccgccattccaggtgcgtatggaaacactgcaccgcgcgcaaaatggcaataac
gcgacctttaccagcagcagcggaagtggccgcagcggaaacagttcgcgctcaccgggc
gatttgtaa
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